Characterization of the complete mitochondrial genome of Bothrocara hollandi (Perciformes: Zoarcidae)

被引:1
|
作者
Kim, Nack-Keun [1 ]
Andriyono, Sapto [1 ,2 ]
Alam, Jobaidul [1 ]
Kim, Sung-Tae [3 ]
Jung, Kyung Mi [3 ]
Kim, Hyun-Woo [1 ,4 ]
机构
[1] Pukyong Natl Univ, Interdisciplinary Program Biomed Mech & Elect Eng, Busan, South Korea
[2] Univ Airlangga, Fisheries & Marine Fac, Surabaya, Indonesia
[3] Natl Inst Fisheries Sci, Dokdo Fisheries Res Ctr, Pohang, South Korea
[4] Pukyong Natl Univ, Dept Marine Biol, Busan 48513, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词
High-throughput sequencing; Bothrocara hollandi; mitogenome; phylogenetic; eelpout; SEA DEMERSAL FISH;
D O I
10.1080/23802359.2018.1551089
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The full mitogenome of Bothrocara hollandi was determined by high-throughput sequencing (HTS) platform. The genome was 16,732 bp in length, which included 13 protein-coding genes, 22 tRNAs, two ribosomal RNAs (12S and 16S), and a control region (D-Loop). The overall composition of G + C in the mitogenome was 45.90%, which was lower than A + T contents (54.10%). Except for COX1 (GTG), the other twelve protein-coding genes begin with typical start codon, ATG. The incomplete stop codon (TA - or T-) was identified in five genes, including COXI, COXII, COXIII, ND3, and ND4. The phylogenetic analysis with the currently reported mitogenome sequences showed that B. hollandi was most closely related to Lycodes tanakae, suggesting that additional mitogenome sequences in genus Bothrocara are required for its clear evolutional relationship.
引用
收藏
页码:523 / 524
页数:2
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