Flavobacterium banpakuense sp nov., isolated from leaf-and-branch compost

被引:13
作者
Kim, Joong-Jae [1 ]
Jin, Hyun Mi [2 ]
Lee, Hyo Jung [2 ]
Jeon, Che Ok [2 ]
Kanaya, Eiko [1 ]
Koga, Yuichi [1 ]
Takano, Kazufumi [1 ,3 ]
Kanaya, Shigenori [1 ]
机构
[1] Osaka Univ, Dept Mat & Life Sci, Grad Sch Engn, Suita, Osaka 5650871, Japan
[2] Chung Ang Univ, Dept Life Sci, Seoul 156756, South Korea
[3] JST, CREST, Suita, Osaka 5650871, Japan
关键词
DEGRADING BACTERIUM; EMENDED DESCRIPTION; FAMILY; IDENTIFICATION; CELLULASE; XYLANASE; TAXA; GENE;
D O I
10.1099/ijs.0.022467-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A strictly aerobic, Gram-stain-negative, yellow-pigmented, non-spore-forming, motile (by gliding), rod-shaped bacterium, designated strain 15F3(T), was isolated from leaf-and-branch compost. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 15F3T was most closely related to Flavobacterium reichenbachii WB 3.2-61(T) and formed a distinct phyletic lineage within the genus Flavobacterium, the type genus of the family Flavobacteriaceae. Growth was observed at 10-34 degrees C (optimum, 30 degrees C) and pH 6.0-8.0 (optimum, pH 7.0). No growth occurred in the presence of >= 2% (w/v) NaCl. Strain 15F3(T) reduced nitrate to nitrogen and showed catalase activity but no oxidase activity. The predominant cellular fatty acids were iso-C-15:0 and summed feature 3 (comprising C-16:1 omega 7c and/or iso-C-15:0 2-OH). The major isoprenoid quinone was menaquinone-6. The G+C content of the genomic DNA was 31.1 mol%. On the basis of data from this polyphasic study, strain 15F3(T) may be classified as a representative of a novel species within the genus Flavobacterium, for which the name Flavobacterium banpakuense sp. nov. is proposed; the type strain is 15F3(T) (=KACC 14225(T) =JCM 16466(T)).
引用
收藏
页码:1595 / 1600
页数:6
相关论文
共 42 条
[21]   Flavobacterium caeni sp nov., isolated from a sequencing batch reactor for the treatment of malachite green effluents [J].
Liu, Ying ;
Jin, Jing-Hua ;
Zhou, Yu-Guang ;
Liu, Hong-Can ;
Liu, Zhi-Pei .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 :417-421
[22]   Flavobacterium johnsoniae GldH is a lipoprotein that is required for gliding motility and chitin utilization [J].
McBride, MJ ;
Braun, TF ;
Brust, JL .
JOURNAL OF BACTERIOLOGY, 2003, 185 (22) :6648-6657
[23]   Taxonomy of Antarctic Flavobacterium species:: description of Flavobacterium gillisiae sp nov., Flavobacterium tegetincola sp nov and Flavobacterium xanthum sp nov., nom. rev. and reclassification of [Flavobacterium] salegens as Salegentibacter salegens gen. nov., comb. nov. [J].
McCammon, SA ;
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1055-1063
[24]   Flavobacterium defluvii sp nov., isolated from activated sludge [J].
Park, Minjeong ;
Ryu, Seung Hyun ;
Vu, Thu-Huong Thi ;
Ro, Hyeon-Su ;
Yun, Pil-Yong ;
Jeon, Che Ok .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :233-237
[26]   Flavobacterium sp Strain 4221 and Pedobacter sp Strain 4236 β-1,3-Glucanases That Are Active at Low Temperatures [J].
Rasmussen, Mikkel A. ;
Madsen, Soren M. ;
Stougaard, Peter ;
Johnsen, Mads G. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (22) :7070-7072
[27]  
REASONER DJ, 1985, APPL ENVIRON MICROB, V49, P1
[28]  
Reichenbach H., 1989, Bergey's Manual of Systematic Bacteriology, V3, P2011
[29]   Isolation and characterization of a feather-degrading bacterium from the poultry processing industry [J].
Riffel, A ;
Brandelli, A .
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 2002, 29 (05) :255-258
[30]   Flavobacterium resistens sp nov., isolated from stream sediment [J].
Ryu, Seung Hyun ;
Park, Jin Ho ;
Moon, Jeong Chan ;
Sung, Youlboong ;
Lee, Sang-Suk ;
Jeon, Che Ok .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :2266-2270