An inventory of the bacterial macromolecular components and their spatial organization

被引:63
作者
Vendeville, Agnes [1 ]
Lariviere, Damien [1 ]
Fourmentin, Eric [1 ]
机构
[1] Fourmentin Guilbert Sci Fdn, 2 Av Pave Neuf, F-93160 Noisy Le Grand, France
关键词
bacterial metabolism; protein abundance; macromolecular crowding; space management; ESCHERICHIA-COLI CHROMOSOME; ATP-DEPENDENT PROTEASES; RIBOSOMAL-RNA OPERONS; CELL-DIVISION PROTEIN; DNA-BINDING PROTEINS; IN-VIVO; BACILLUS-SUBTILIS; TURGOR PRESSURE; E; COLI; ACTIVE TRANSCRIPTION;
D O I
10.1111/j.1574-6976.2010.00254.x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Formerly regarded as small 'bags' of nucleic acids with randomly diffusing enzymes, bacteria are organized by a sophisticated and tightly regulated molecular machinery. Here, we review qualitative and quantitative data on the intracellular organization of bacteria and provide a detailed inventory of macromolecular structures such as the divisome, the degradosome and the bacterial 'nucleolus'. We discuss how these metabolically active structures manage the spatial organization of the cell and how macromolecular crowding influences them. We present for the first time a visualization program, lifeexplorer, that can be used to study the interplay between metabolism and spatial organization of a prokaryotic cell.
引用
收藏
页码:395 / 414
页数:20
相关论文
共 177 条
[1]   On the origins of a crowded cytoplasm [J].
Acerenza, Luis ;
Grana, Martin .
JOURNAL OF MOLECULAR EVOLUTION, 2006, 63 (05) :583-590
[2]   Bacterial cell division: assembly, maintenance and disassembly of the Z ring [J].
Adams, David W. ;
Errington, Jeff .
NATURE REVIEWS MICROBIOLOGY, 2009, 7 (09) :642-653
[3]   Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid [J].
Azam, TA ;
Hiraga, S ;
Ishihama, A .
GENES TO CELLS, 2000, 5 (08) :613-626
[4]   ATP-dependent proteases of bacteria: recognition logic and operating principles [J].
Baker, Tania A. ;
Sauer, Robert T. .
TRENDS IN BIOCHEMICAL SCIENCES, 2006, 31 (12) :647-653
[5]   Chromosome and replisome dynamics in E. coli:: Loss of sister cohesion triggers global chromosome movement and mediates chromosome segregation [J].
Bates, D ;
Kleckner, N .
CELL, 2005, 121 (06) :899-911
[6]   Towards building a chromosome segregation machine [J].
Bloom, Kerry ;
Joglekar, Ajit .
NATURE, 2010, 463 (7280) :446-456
[7]  
Booth Ian R., 2008, P73, DOI 10.1007/978-3-540-74921-9_3
[8]   The Native 3D Organization of Bacterial Polysomes [J].
Brandt, Florian ;
Etchells, Stephanie A. ;
Ortiz, Julio O. ;
Elcock, Adrian H. ;
Hartl, F. Ulrich ;
Baumeister, Wolfgang .
CELL, 2009, 136 (02) :261-271
[9]   Free RNA polymerase and modeling global transcription in Escherichia coli [J].
Bremer, H ;
Dennis, P ;
Ehrenberg, M .
BIOCHIMIE, 2003, 85 (06) :597-609
[10]  
Bremer H., 1996, Escherichia coli and Salmonella: Cellular and Molecular Biology