In-vivo quantification of primary microRNA processing by Drosha with a luciferase based system

被引:18
作者
Allegra, Danilo
Mertens, Daniel [1 ]
机构
[1] Univ Hosp, Dept Internal Med 3, D-89081 Ulm, Germany
关键词
MicroRNA; Luciferase; miRNA processing assay; Drosha; Microprocessor; miR-16; RNA; MATURATION; RECOGNITION; COMPLEX; REGION; SUBSET; DICER;
D O I
10.1016/j.bbrc.2011.02.055
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The RNAse III Drosha is responsible for the first step of microRNA maturation, the cleavage of primary miRNA to produce the precursor miRNA. Processing by Drosha is finely regulated and influences the amount of mature microRNA in a cell. We describe in the present work a method to quantify Drosha processing activity in-vivo, which is applicable to any microRNA. With respect to other methods for measuring Drosha activity, our system is faster and scalable, can be used with any cellular system and does not require cell sorting or use of radioactive isotopes. This system is useful to study regulation of Drosha activity in physiological and pathological conditions. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:501 / 505
页数:5
相关论文
共 19 条
[1]   MicroRNAs: Target Recognition and Regulatory Functions [J].
Bartel, David P. .
CELL, 2009, 136 (02) :215-233
[2]   A MicroRNA signature associated with prognosis and progression in chronic lymphocytic leukemia [J].
Calin, GA ;
Ferracin, M ;
Cimmino, A ;
Di Leva, G ;
Shimizu, M ;
Wojcik, SE ;
Iorio, MV ;
Visone, R ;
Sever, NI ;
Fabbri, M ;
Iuliano, R ;
Palumbo, T ;
Pichiorri, F ;
Roldo, C ;
Garzon, R ;
Sevignani, C ;
Rassenti, L ;
Alder, H ;
Volinia, S ;
Liu, CG ;
Kipps, TJ ;
Negrini, M ;
Croce, CM .
NEW ENGLAND JOURNAL OF MEDICINE, 2005, 353 (17) :1793-1801
[3]   Causes and consequences of microRNA dysregulation in cancer [J].
Croce, Carlo M. .
NATURE REVIEWS GENETICS, 2009, 10 (10) :704-714
[4]   Smad Proteins Bind a Conserved RNA Sequence to Promote MicroRNA Maturation by Drosha [J].
Davis, Brandi N. ;
Hilyard, Aaron C. ;
Nguyen, Peter H. ;
Lagna, Giorgio ;
Hata, Akiko .
MOLECULAR CELL, 2010, 39 (03) :373-384
[5]   A noncommercial dual luciferase enzyme assay system for reporter gene analysis [J].
Dyer, BW ;
Ferrer, FA ;
Klinedinst, DK ;
Rodriguez, R .
ANALYTICAL BIOCHEMISTRY, 2000, 282 (01) :158-161
[6]   Getting to the root of miRNA-Mediated gene silencing [J].
Eulalio, Ana ;
Huntzinger, Eric ;
Izaurralde, Elisa .
CELL, 2008, 132 (01) :9-14
[7]   Most mammalian mRNAs are conserved targets of microRNAs [J].
Friedman, Robin C. ;
Farh, Kyle Kai-How ;
Burge, Christopher B. ;
Bartel, David P. .
GENOME RESEARCH, 2009, 19 (01) :92-105
[8]   RETRACTED: DEAD-box RNA helicase subunits of the Drosha complex are required for processing of rRNA and a subset of microRNAs (Retracted article. See vol. 16, pg. 1126, 2014) [J].
Fukuda, Toru ;
Yamagata, Kaoru ;
Fujiyama, Sally ;
Matsumoto, Takahiro ;
Koshida, Iori ;
Yoshimura, Kimihiro ;
Mihara, Masatomo ;
Naitou, Masanori ;
Endoh, Hideki ;
Nakamura, Takashi ;
Akimoto, Chihiro ;
Yamamoto, Yoko ;
Katagiri, Takenobu ;
Foulds, Charles ;
Takezawa, Shinichiro ;
Kitagawa, Hirochika ;
Takeyama, Ken-ichi ;
O'Malley, Bert W. ;
Kato, Shigeaki .
NATURE CELL BIOLOGY, 2007, 9 (05) :604-U221
[9]   The Vienna RNA Websuite [J].
Gruber, Andreas R. ;
Lorenz, Ronny ;
Bernhart, Stephan H. ;
Neuboeck, Richard ;
Hofacker, Ivo L. .
NUCLEIC ACIDS RESEARCH, 2008, 36 :W70-W74
[10]   The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a [J].
Guil, Sonia ;
Caceres, Javier F. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (07) :591-596