The Species Problem in Myxomycetes Revisited

被引:25
作者
Walker, Laura M. [1 ]
Stephenson, Steven L. [1 ]
机构
[1] Univ Arkansas, Dept Biol Sci, Fayetteville, AR 72701 USA
基金
美国国家科学基金会;
关键词
Ecology; molecular taxonomy; myxomycete; phylogeny; slime mold; species concept; IRIDIS REPRODUCTIVE-SYSTEMS; DIDYMIUM-IRIDIS; SLIME-MOLDS; REVISED CLASSIFICATION; PHYLOGENETIC POSITION; MATING SYSTEMS; DIVERSITY; EVOLUTION; TAXONOMY; HETEROTHALLISM;
D O I
10.1016/j.protis.2016.05.003
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Species identification in the myxomycetes (plasmodial slime molds or myxogastrids) poses particular challenges to researchers as a result of their morphological plasticity and frequent alteration between sexual and asexual life strategies. Traditionally, myxomycete morphology has been used as the primary method of species delimitation. However, with the increasing availability of genetic information, traditional myxomycete taxonomy is being increasingly challenged, and new hypotheses continue to emerge. Due to conflicts that sometimes occur between traditional and more modern species concepts that are based largely on molecular data, there is a pressing need to revisit the discussion surrounding the species concept used for myxomycetes. Biological diversity is being increasingly studied with molecular methods and data accumulates at ever-faster rates, making resolution of this matter urgent. In this review, currently used and potentially useful species concepts (biological, morphological, phylogenetic and ecological) are reviewed, and an integrated approach to resolve the myxomycete species problem is discussed. (C) 2016 Elsevier GmbH. All rights reserved.
引用
收藏
页码:319 / 338
页数:20
相关论文
共 149 条
[1]   Diversity, nomenclature, and taxonomy of protists [J].
Adl, Sina M. ;
Leander, Brian S. ;
Simpson, Alastair G. B. ;
Archibald, John M. ;
Anderson, O. Roger ;
Bass, David ;
Bowser, Samuel. S. ;
Brugerolle, Guy ;
Farmer, Mark A. ;
Karpov, Sergey ;
Kolisko, Martin ;
Lane, Christopher E. ;
Lodge, Deborah J. ;
Mann, David G. ;
Meisterfeld, Ralf ;
Mendoza, Leonel ;
Moestrup, Ojvind ;
Mozley-Standridge, Sharon E. ;
Smirnov, Alexey V. ;
Spiegel, Frederick .
SYSTEMATIC BIOLOGY, 2007, 56 (04) :684-689
[2]   The Revised Classification of Eukaryotes [J].
Adl, Sina M. ;
Simpson, Alastair G. B. ;
Lane, Christopher E. ;
Lukes, Julius ;
Bass, David ;
Bowser, Samuel S. ;
Brown, Matthew W. ;
Burki, Fabien ;
Dunthorn, Micah ;
Hampl, Vladimir ;
Heiss, Aaron ;
Hoppenrath, Mona ;
Lara, Enrique ;
le Gall, Line ;
Lynn, Denis H. ;
McManus, Hilary ;
Mitchell, Edward A. D. ;
Mozley-Stanridge, Sharon E. ;
Parfrey, Laura W. ;
Pawlowski, Jan ;
Rueckert, Sonja ;
Shadwick, Laura ;
Schoch, Conrad L. ;
Smirnov, Alexey ;
Spiegel, Frederick W. .
JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2012, 59 (05) :429-493
[3]   Using environmental niche models to test the 'everything is everywhere' hypothesis for Badhamia [J].
Aguilar, Maria ;
Fiore-Donno, Anna-Maria ;
Lado, Carlos ;
Cavalier-Smith, Thomas .
ISME JOURNAL, 2014, 8 (04) :737-745
[4]   INFLUENCE OF INORGANIC-IONS ON COLOR OF LIME IN THE MYXOMYCETES [J].
ALDRICH, HC .
MYCOLOGIA, 1982, 74 (03) :404-411
[5]   ABSENCE OF CAPILLITIUM AS A TAXONOMIC CHARACTER IN MYXOMYCETES [J].
ALEXOPOULOS, CJ .
TRANSACTIONS OF THE BRITISH MYCOLOGICAL SOCIETY, 1976, 66 (APR) :329-329
[6]   What to do with Protists? [J].
Andersen, RA .
AUSTRALIAN SYSTEMATIC BOTANY, 1998, 11 (02) :185-201
[7]  
[Anonymous], 2009, Contemporary debates in philosophy of biology, DOI DOI 10.1002/9781444314922.CH6
[8]   Differentiation of some myxomycetes species by ITS sequences [J].
Baba, Hayri ;
Kolukirik, Mustafa ;
Zumre, Murat .
TURKISH JOURNAL OF BOTANY, 2015, 39 (02) :377-382
[9]   Origin and evolution of the slime molds (Mycetozoa) [J].
Baldauf, SL ;
Doolittle, WF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (22) :12007-12012
[10]   A search for the origins of animals and fungi: Comparing and combining molecular data [J].
Baldauf, SL .
AMERICAN NATURALIST, 1999, 154 :S178-S188