Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjogren's syndrome

被引:7
作者
Withanage, Miyuraj Harishchandra Hikkaduwa [1 ]
Hernandez, M. Paula Gomez [2 ]
Starman, Emily E. [3 ]
Davis, Andrew B. [4 ]
Zeng, Erliang [1 ]
Lieberman, Scott M. [5 ]
Brogden, Kim A. [2 ]
Lanzel, Emily A. [6 ]
机构
[1] Univ Iowa, Coll Dent, Div Biostat & Computat Biol, Iowa City, IA 52242 USA
[2] Univ Iowa, Coll Dent, Pediat Dent, Iowa City, IA 52242 USA
[3] Univ Iowa, Coll Dent, Iowa Inst Oral Hlth Res, Iowa City, IA 52242 USA
[4] Univ Iowa, Coll Med, Dept Otolaryngol, Iowa City, IA USA
[5] Univ Iowa, Carver Coll Med, Stead Family Dept Pediat, Div Rheumatol Allergy & Immunol, Iowa City, IA USA
[6] Univ Iowa, Coll Dent, Dept Oral Pathol Radiol & Med, Iowa City, IA 52242 USA
关键词
Sjogren's syndrome; Children; Saliva; Chemokines; Cytokines; Biomarkers;
D O I
10.1016/j.dib.2021.107139
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Sjogren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study [1], we reported a large dataset of 105 CCBMs that were associated with both lymphocyte and mononuclear cell functions [2] in the saliva of 11 children formally diagnosed with Sjogren's syndrome and 16 normal healthy children. Here, we extend those findings and use the Mendeley dataset [2] to identify CCBMs that have predictive power for Sjogren's syndrome in female children. Datasets of CCBMs from all saliva samples and female children saliva samples were standardized. We used machine learning methods to select Sjogren's syndrome associated CCBMs and assessed the predictive power of selected CCBMs in these two datasets using receiver operating characteristic (ROC) curves and associated areas under curve (AUC) as metrics. We used eight classifiers to identify 16 datasets that contained from 2 to 34 CCBMs with AUC values ranging from 0.91 to 0.94. (C) 2021 The Author(s). Published by Elsevier Inc.
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页数:8
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