STOCHSIM:: modelling of stochastic biomolecular processes

被引:124
作者
Le Novère, N [1 ]
Shimizu, TS [1 ]
机构
[1] Univ Cambridge, Dept Zool, Cambridge CB2 3EJ, England
关键词
D O I
10.1093/bioinformatics/17.6.575
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
STOCHSIM is a stochastic simulator for chemical reactions. Molecules are represented as individual software objects that react according to probabilities derived from concentrations and rate constants. Version 1.2 of STOCHSIM provides a novel cross-platform graphical interface written in Perl/Tk. A simple two-dimensional spatial structure has also been implemented, in which nearest-neighbour interactions of molecules in a 2-D lattice can be simulated.
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页码:575 / 576
页数:2
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