The mitochondrial genome of Morchella importuna (272.2 kb) is the largest among fungi and contains numerous introns, mitochondrial non-conserved open reading frames and repetitive sequences

被引:43
作者
Liu, Wei [1 ]
Cai, Yingli [2 ]
Zhang, Qianqian [1 ]
Chen, Lianfu [1 ]
Shu, Fang [1 ]
Ma, Xiaolong [2 ]
Bian, Yinbing [1 ]
机构
[1] Huazhong Agr Univ, Inst Appl Mycol, Wuhan 430070, Peoples R China
[2] Wuhan Acad Agr Sci, Inst Vegetable, Wuhan 430070, Peoples R China
关键词
Mitochondrial introns; Free-standing ORF; Homing endonucleases; Reverse transcriptase; DNA; RECOMBINATION; SENESCENCE; ALIGNMENT; PLASMIDS; REVEALS; PROGRAM; PROTEIN; GENES; SIZE;
D O I
10.1016/j.ijbiomac.2019.12.056
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The complete mitochondrial genome of Morchella importuna, the famous edible and medicinal mushroom, was assembled as a 272,238 bp single circular dsDNA. As the largest mitogenome among fungi, it exhibits several distinct characteristics. The mitogenome of M. importuna encoded 14 core conserved mitochondrial protein-coding genes and 151 mitochondrial non-conserved open reading frames (ncORFs) were predicted, of which 61 were annotated as homing endonuclease genes, and 108 were confirmed to be expressed during the vegetative growth stages of M. importuna. In addition, 34 introns were identified in seven core genes (cob, cox1, cox2, cox3, nad1, nad4 and nad5) and two rRNA genes (rrnS and rrnL) with a length from 383 bp to 7453 bp, and eight large introns with a length range of 2340 bp to 7453 bp contained multiple intronic mtORFs. Moreover, 34 group I (IA, IB, IC1, IC2, ID and derived group I introns) and four group II intron domains were identified for the 34 introns, including five hybrid ones. Furthermore, the M. importuna mitogenome showed the presence of about 18.7% mitogenomic interspersed repeats. These and the aforementioned ncORFs and introns, contributed to the enlarged size of the mitogenome. (C) 2019 Published by Elsevier B.V.
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收藏
页码:373 / 381
页数:9
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