Multi-class SVM model for fMRI-based classification and grading of liver fibrosis

被引:0
作者
Freiman, M. [1 ]
Sela, Y. [1 ]
Edrei, Y. [2 ]
Pappo, O. [3 ]
Joskowicz, L. [1 ]
Abramovitch, R. [2 ]
机构
[1] Hebrew Univ Jerusalem, Sch Engn & Comp Sci, IL-91905 Jerusalem, Israel
[2] Hadassah Hebrew Univ, G Savad Inst Gene Therapy, MRI MRS Lab HBRC, Jerusalem, Israel
[3] Hadassah Hebrew Univ, Ctr Med, Dept Pathol, Jerusalem, Israel
来源
MEDICAL IMAGING 2010: COMPUTER - AIDED DIAGNOSIS | 2010年 / 7624卷
关键词
Abdominal; Characterization; Machine Learning; MR; DIAGNOSIS; PERFUSION; BIOPSY; HYPEROXIA; CIRRHOSIS;
D O I
10.1117/12.841242
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
We present a novel non-invasive automatic method for the classification and grading of liver fibrosis from fMRI maps based on hepatic hemodynamic changes. This method automatically creates a model for liver fibrosis grading based on training datasets. Our supervised learning method evaluates hepatic hemodynamics from an anatomical MRI image and three T2*-W fMRI signal intensity time-course scans acquired during the breathing of air, air-carbon dioxide, and carbogen. It constructs a statistical model of liver fibrosis from these fMRI scans using a binary-based one-against-all multi class Support Vector Machine (SVM) classifier. We evaluated the resulting classification model with the leave-one out technique and compared it to both full multi-class SVM and K-Nearest Neighbor (KNN) classifications. Our experimental study analyzed 57 slice sets from 13 mice, and yielded a 98.2% separation accuracy between healthy and low grade fibrotic subjects, and an overall accuracy of 84.2% for fibrosis grading. These results are better than the existing image-based methods which can only discriminate between healthy and high grade fibrosis subjects. With appropriate extensions, our method may be used for non-invasive classification and progression monitoring of liver fibrosis in human patients instead of more invasive approaches, such as biopsy or contrast-enhanced imaging.
引用
收藏
页数:8
相关论文
共 27 条
[1]   Hepatic flow parameters measured with MR imaging and Doppler US: Correlations with degree of cirrhosis and portal hypertension [J].
Annet, L ;
Materne, R ;
Danse, E ;
Jamart, J ;
Horsmans, Y ;
Van Beers, BE .
RADIOLOGY, 2003, 229 (02) :409-414
[2]   Assessment of diffusion-weighted MR imaging in liver fibrosis [J].
Annet, Laurence ;
Peeters, Frank ;
Abarca-Quinones, Jorge ;
Leclercq, Isabelle ;
Moulin, Pierre ;
Van Beers, Bernard E. .
JOURNAL OF MAGNETIC RESONANCE IMAGING, 2007, 25 (01) :122-128
[3]   Functional MR imaging during hypercapnia and hyperoxia: Noninvasive tool for monitoring changes in liver perfusion and hemodynamics in a rat model [J].
Barash, Hila ;
Gross, Eitan ;
Matot, Idit ;
Edrei, Yifat ;
Tsarfaty, Galia ;
Spira, Gadi ;
Vlodavsky, Israel ;
Galun, Eithan ;
Abramovitch, Rinat .
RADIOLOGY, 2007, 243 (03) :727-735
[4]   Functional magnetic resonance imaging monitoring of pathological changes in rodent livers during hyperoxia and hypercapnia [J].
Barasli, Hila ;
Gross, Eitan ;
Edrei, Wat ;
Pappo, Orit ;
Spira, Gadi ;
Vlodavsky, Israel ;
Galun, Eithan ;
Matot, Idit ;
Abramovitch, Rinat .
HEPATOLOGY, 2008, 48 (04) :1232-1241
[5]   CHRONIC HEPATITIS - AN UPDATE ON TERMINOLOGY AND REPORTING [J].
BATTS, KP ;
LUDWIG, J .
AMERICAN JOURNAL OF SURGICAL PATHOLOGY, 1995, 19 (12) :1409-1417
[6]   Can imaging modalities diagnose and stage hepatic fibrosis and cirrhosis accurately? [J].
Bonekamp, Susanne ;
Kamel, Ihab ;
Solga, Steven ;
Clark, Jeanne .
JOURNAL OF HEPATOLOGY, 2009, 50 (01) :17-35
[7]   Current concepts: Liver biopsy. [J].
Bravo, AA ;
Sheth, SG ;
Chopra, S .
NEW ENGLAND JOURNAL OF MEDICINE, 2001, 344 (07) :495-500
[8]   NEAREST NEIGHBOR PATTERN CLASSIFICATION [J].
COVER, TM ;
HART, PE .
IEEE TRANSACTIONS ON INFORMATION THEORY, 1967, 13 (01) :21-+
[9]   On the algorithmic implementation of multiclass kernel-based vector machines [J].
Crammer, K ;
Singer, Y .
JOURNAL OF MACHINE LEARNING RESEARCH, 2002, 2 (02) :265-292
[10]  
Freiman M, 2008, LECT NOTES COMPUT SC, V5241, P85, DOI 10.1007/978-3-540-85988-8_11