Toward Convergence of Experimental Studies and Theoretical Modeling of the Chromatin Fiber

被引:77
作者
Schlick, Tamar [1 ,2 ]
Hayes, Jeff [3 ]
Grigoryev, Sergei [4 ]
机构
[1] NYU, Dept Chem, New York, NY 10003 USA
[2] NYU, Courant Inst Math Sci, New York, NY 10012 USA
[3] Univ Rochester, Dept Biochem & Biophys, Med Ctr, Rochester, NY 14642 USA
[4] Penn State Univ, Dept Biochem & Mol Biol, Coll Med, Hershey, PA 17033 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
HIGHER-ORDER STRUCTURE; MOLECULE FORCE SPECTROSCOPY; RESONANCE ENERGY-TRANSFER; NUCLEOSOME CORE PARTICLE; DNA LINKER LENGTH; X-RAY-DIFFRACTION; TERMINAL DOMAIN; METAPHASE CHROMOSOMES; ANGSTROM RESOLUTION; H4-K16; ACETYLATION;
D O I
10.1074/jbc.R111.305763
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Understanding the structural organization of eukaryotic chromatin and its control of gene expression represents one of the most fundamental and open challenges in modern biology. Recent experimental advances have revealed important characteristics of chromatin in response to changes in external conditions and histone composition, such as the conformational complexity of linker DNA and histone tail domains upon compact folding of the fiber. In addition, modeling studies based on high-resolution nucleosome models have helped explain the conformational features of chromatin structural elements and their interactions in terms of chromatin fiber models. This minireview discusses recent progress and evidence supporting structural heterogeneity in chromatin fibers, reconciling apparently contradictory fiber models.
引用
收藏
页码:5183 / 5191
页数:9
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