Halogeometricum rufum sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halogeometricum

被引:12
作者
Cui, Heng-Lin [1 ]
Yang, Xin [1 ]
Gao, Xia [1 ]
Li, Xin-Yi [1 ]
Xu, Xue-Wei [2 ]
Zhou, Yu-Guang [3 ]
Liu, Hong-Can [3 ]
Zhou, Pei-Jin [3 ]
机构
[1] Jiangsu Univ, Sch Food & Biol Engn, Zhenjiang 212013, Peoples R China
[2] State Ocean Adm, Inst Oceanog 2, Hangzhou 310012, Zhejiang, Peoples R China
[3] Chinese Acad Sci, Inst Microbiol, Beijing 100101, Peoples R China
基金
中国国家自然科学基金;
关键词
DNA HYBRIDIZATION;
D O I
10.1099/ijs.0.019463-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two halophilic archaea, strains RO1-4(T) and RO1-64, were isolated from a marine solar saltern in Jiangsu, China. Cells of the two strains were pleomorphic, motile, and stained Gram-negative. Colonies were red-pigmented. Strains RO1-4(T) and RO1-64 were able to grow at 25-55 degrees C (optimum 40-42 degrees C), at 2.1-5.1 M NaCl (optimum 3.9 M NaCl), at 0.05-0.7 M MgCl2 (optimum 0.3 M MgCl2) and at pH 6.0-8.5 (optimum pH 7.0). Cells lyse in distilled water and the minimal NaCl concentration to prevent cell lysis is 12 % (w/v). On the basis of 16S rRNA gene sequence analysis, strains RO1-4(T) and RO1-64 were closely related to Halogeometricum borinquense PR3(T) (98.0 and 98.2 % similarity, respectively) and Halosarcina pallida BZ256(T) (97.8 and 97.9 %). The major polar lipids of the two strains were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and two glycolipids (S-DGD-1 and DGD-1). The DNA G+C contents of strains RO1-4(T) and RO1-64 are 64.9 and 62.4 mol%, respectively. The DNA-DNA hybridization value between strains RO1-4(T) and RO1-64 was 83.0 % and both strains showed low DNA-DNA relatedness with Halogeometricum borinquense PR3(T) (42.5 and 50.1 % relatedness, respectively) and Halosarcina pallida BZ256(T) (37.6 and 42.1 % relatedness). It was concluded that strains RO1-4(T) and RO1-64 represent a novel species of the genus Halogeometricum, for which the name Halogeometricum rufum sp. nov. is proposed. The type strain is RO1-4(T) (=CGMCC 1.7736(T) =JCM 15770(T)).
引用
收藏
页码:2613 / 2617
页数:5
相关论文
共 23 条
[1]  
[Anonymous], 1986, Techniques of lipidology: isolation, analysis and identification of lipids
[2]   Haloplanus natans gen nov, sp nov, an extremely halophilic, gas-vacuolate archaeon isolated from Dead Sea Red Sea water mixtures in experimental outdoor ponds [J].
Bardavid, Rahel Elevi ;
Mana, Lily ;
Oren, Aharon .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :780-783
[3]   EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences [J].
Chun, Jongsik ;
Lee, Jae-Hak ;
Jung, Yoonyoung ;
Kim, Myungjin ;
Kim, Seil ;
Kim, Byung Kwon ;
Lim, Young-Woon .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2259-2261
[4]   Halorubrum litoreum sp nov., an extremely halophilic archaeon from a solar saltern [J].
Cui, Heng-Lin ;
Lin, Ze-Ying ;
Dong, Ying ;
Zhou, Pei-Jin ;
Liu, Shuang-Jiang .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2204-2206
[5]   Intraspecific polymorphism of 16S rRNA genes in two halophilic archaeal genera, Haloarcula and Halomicrobium [J].
Cui, Heng-Lin ;
Zhou, Pei-Jin ;
Oren, Aharon ;
Liu, Shuang-Jiang .
EXTREMOPHILES, 2009, 13 (01) :31-37
[6]  
DELEY J, 1970, EUR J BIOCHEM, V12, P133
[7]   AN IMPROVED TECHNIQUE FOR STAINING RED HALOPHILIC BACTERIA [J].
DUSSAULT, HP .
JOURNAL OF BACTERIOLOGY, 1955, 70 (04) :484-485
[8]  
Dyall-Smith M., 2008, The Halohandbook: Protocols for Haloarchaeal Genetics
[9]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[10]   HALOBACTERIUM-VALLISMORTIS-SP-NOV - AMYLOLYTIC AND CARBOHYDRATE-METABOLIZING, EXTREMELY HALOPHILIC BACTERIUM [J].
GONZALEZ, C ;
GUTIERREZ, C ;
RAMIREZ, C .
CANADIAN JOURNAL OF MICROBIOLOGY, 1978, 24 (06) :710-715