Replication Study for the Association Between Four Loci Identified by a Genome-Wide Association Study on European American Subjects With Type 1 Diabetes and Susceptibility to Diabetic Nephropathy in Japanese Subjects With Type 2 Diabetes

被引:45
作者
Maeda, Shiro [1 ,2 ]
Araki, Shin-ichi [3 ]
Babazono, Tetsuya [4 ]
Toyoda, Masao [5 ]
Umezono, Tomoya [5 ]
Kawai, Koichi [6 ]
Imanishi, Masahito [7 ]
Uzu, Takashi [3 ]
Watada, Hirotaka [2 ,8 ]
Suzuki, Daisuke [5 ]
Kashiwagi, Atsunori [3 ]
Iwamoto, Yasuhiko [4 ]
Kaku, Kohei [9 ]
Kawamori, Ryuzo [2 ,8 ]
Nakamura, Yusuke [10 ]
机构
[1] RIKEN, Ctr Genom Med, Lab Endocrinol & Metab, Yokohama, Kanagawa, Japan
[2] Juntendo Univ, Grad Sch Med, Sportol Ctr, Tokyo, Japan
[3] Shiga Univ Med Sci, Dept Med, Otsu, Shiga 52021, Japan
[4] Tokyo Womens Med Univ, Ctr Diabet, Tokyo, Japan
[5] Tokai Univ, Sch Med, Dept Internal Med, Div Nephrol & Metab, Isehara, Kanagawa 25911, Japan
[6] Kawai Clin, Tsukuba, Ibaraki, Japan
[7] Osaka City Gen Hosp, Div Nephrol & Hypertens, Dept Internal Med, Osaka, Japan
[8] Juntendo Univ, Sch Med, Dept Med Metab & Endocrinol, Tokyo 113, Japan
[9] Kawasaki Med Sch, Dept Internal Med, Div Endocrinol & Metab, Kurashiki, Okayama, Japan
[10] Univ Tokyo, Inst Med Sci, Mol Med Lab, Ctr Human Genome, Tokyo, Japan
关键词
GENETIC-VARIATIONS; VARIANTS; DISEASE; KCNQ1;
D O I
10.2337/db10-0067
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
OBJECTIVE-Genetic factors are believed to contribute to the development and progression of diabetic nephropathy. Recently, a genome-wide association study for diabetic nephropathy revealed four novel candidate loci in European American subjects with type 1 diabetes. In this study, we determined the association of the four loci with diabetic nephropathy in Japanese subjects with type 2 diabetes. RESEARCH DESIGN AND METHODS-We genotyped 11 single-nucleotide polymorphisms (SNPs) in four distinct loci (rs39059 and rs39075 in the CPVL/CHN2, rs1888747 and rs10868025 in FRMD3, rs739401 and rs451041 in CARS, and rs1041466, rs1411766, rs6492208, rs7989848, and rs9521445 in a chromosome 13q locus) in four independent Japanese populations RESULTS-Six SNPs were nominally associated with diabetic nephropathy in one of the four Japanese populations (P < 0 05, rs451041 in study 1, rs39059 and rs1888747 in study 3; rs1411766 in studies 1 and 4; and rs7989848 and rs9521445 in study 4); however, no significant association was observed for any SNP after correction for multiple testing errors in the individual populations. Nevertheless, a meta-analysis performed for the data obtained from all four populations revealed that one SNP (rs1411766) in chromosome 13q was significantly associated with diabetic nephropathy in the Japanese populations (nominal P = 0.004, corrected P = 0.04, odds ratio 1.26 [95% CI = 1 07-1.47]). CONCLUSIONS-Our results suggest that the rs1411766 locus may be commonly involved in conferring susceptibility to diabetic nephropathy among subjects with type 1 or type 2 diabetes across different ethnic groups. Diabetes 59:2075-2079, 2010
引用
收藏
页码:2075 / 2079
页数:5
相关论文
共 50 条
[21]   Multi-ethnic genome-wide association study identifies novel locus for type 2 diabetes susceptibility [J].
Cook, James P. ;
Morris, Andrew P. .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2016, 24 (08) :1175-1180
[22]   Association between single nucleotide polymorphisms within genes encoding sirtuin families and diabetic nephropathy in Japanese subjects with type 2 diabetes [J].
Maeda, Shiro ;
Koya, Daisuke ;
Araki, Shin-ichi ;
Babazono, Tetsuya ;
Umezono, Tomoya ;
Toyoda, Masao ;
Kawai, Koichi ;
Imanishi, Masahito ;
Uzu, Takashi ;
Suzuki, Daisuke ;
Maegawa, Hiroshi ;
Kashiwagi, Atsunori ;
Iwamoto, Yasuhiko ;
Nakamura, Yusuke .
CLINICAL AND EXPERIMENTAL NEPHROLOGY, 2011, 15 (03) :381-390
[23]   A Single Nucleotide Polymorphism in KCNQ1 Is Associated With Susceptibility to Diabetic Nephropathy in Japanese Subjects With Type 2 Diabetes [J].
Ohshige, Toshihiko ;
Tanaka, Yasushi ;
Araki, Shin-ichi ;
Babazono, Tetsuya ;
Toyoda, Masao ;
Umezono, Tomoya ;
Watada, Hirotaka ;
Suzuki, Daisuke ;
Iwamoto, Yasuhiko ;
Kawamori, Ryuzo ;
Nakamura, Yusuke ;
Maeda, Shiro .
DIABETES CARE, 2010, 33 (04) :842-846
[24]   Replication Study for the Association of 9 East Asian GWAS-Derived Loci with Susceptibility to Type 2 Diabetes in a Japanese Population [J].
Sakai, Kensuke ;
Imamura, Minako ;
Tanaka, Yasushi ;
Iwata, Minoru ;
Hirose, Hiroshi ;
Kaku, Kohei ;
Maegawa, Hiroshi ;
Watada, Hirotaka ;
Tobe, Kazuyuki ;
Kashiwagi, Atsunori ;
Kawamori, Ryuzo ;
Maeda, Shiro .
PLOS ONE, 2013, 8 (09)
[25]   A Genome-Wide Association Study Identifies GRK5 and RASGRP1 as Type 2 Diabetes Loci in Chinese Hans [J].
Li, Huaixing ;
Gan, Wei ;
Lu, Ling ;
Dong, Xiao ;
Han, Xueyao ;
Hu, Cheng ;
Yang, Zhen ;
Sun, Liang ;
Bao, Wei ;
Li, Pengtao ;
He, Meian ;
Sun, Liangdan ;
Wang, Yiqin ;
Zhu, Jingwen ;
Ning, Qianqian ;
Tang, Yong ;
Zhang, Rong ;
Wen, Jie ;
Wang, Di ;
Zhu, Xilin ;
Guo, Kunquan ;
Zuo, Xianbo ;
Guo, Xiaohui ;
Yang, Handong ;
Zhou, Xianghai ;
Zhang, Xuejun ;
Qi, Lu ;
Loos, Ruth J. F. ;
Hu, Frank B. ;
Wu, Tangchun ;
Liu, Ying ;
Liu, Liegang ;
Yang, Ze ;
Hu, Renming ;
Jia, Weiping ;
Ji, Linong ;
Li, Yixue ;
Lin, Xu .
DIABETES, 2013, 62 (01) :291-298
[26]   Genome-wide association study of INDELs identified four novel susceptibility loci associated with lung cancer risk [J].
Dai, Juncheng ;
Huang, Mingtao ;
Amos, Christopher I. ;
Hung, Rayjean J. ;
Tardon, Adonina ;
Andrew, Angeline ;
Chen, Chu ;
Christiani, David C. ;
Albanes, Demetrius ;
Rennert, Gadi ;
Fan, Jingyi ;
Goodman, Gary ;
Liu, Geoffrey ;
Field, John K. ;
Grankvist, Kjell ;
Kiemeney, Lambertus A. ;
Le Marchand, Loic ;
Schabath, Matthew B. ;
Johansson, Mattias ;
Aldrich, Melinda C. ;
Johansson, Mikael ;
Caporaso, Neil ;
Lazarus, Philip ;
Lam, Stephan ;
Bojesen, Stig E. ;
Arnold, Susanne ;
Landi, Maria Teresa ;
Risch, Angela ;
Wichmann, H-Erich ;
Bickeboller, Heike ;
Brennan, Paul ;
Shete, Sanjay ;
Melander, Olle ;
Brunnstrom, Hans ;
Zienolddiny, Shan ;
Woll, Penella ;
Stevens, Victoria ;
Hu, Zhibin ;
Shen, Hongbing .
INTERNATIONAL JOURNAL OF CANCER, 2020, 146 (10) :2855-2864
[27]   Genome-Wide Association Scan Allowing for Epistasis in Type 2 Diabetes [J].
Bell, Jordana T. ;
Timpson, Nicholas J. ;
Rayner, N. William ;
Zeggini, Eleftheria ;
Frayling, Timothy M. ;
Hattersley, Andrew T. ;
Morris, Andrew P. ;
McCarthy, Mark I. .
ANNALS OF HUMAN GENETICS, 2011, 75 :10-19
[28]   Genome-Wide Association Study for Type 2 Diabetes in Indians Identifies a New Susceptibility Locus at 2q21 [J].
Tabassum, Rubina ;
Chauhan, Ganesh ;
Dwivedi, Om Prakash ;
Mahajan, Anubha ;
Jaiswal, Alok ;
Kaur, Ismeet ;
Bandesh, Khushdeep ;
Singh, Tejbir ;
Mathai, Benan John ;
Pandey, Yogesh ;
Chidambaram, Manickam ;
Sharma, Amitabh ;
Chavali, Sreenivas ;
Sengupta, Shantanu ;
Ramakrishnan, Lakshmi ;
Venkatesh, Pradeep ;
Aggarwal, Sanjay K. ;
Ghosh, Saurabh ;
Prabhakaran, Dorairaj ;
Srinath, Reddy K. ;
Saxena, Madhukar ;
Banerjee, Monisha ;
Mathur, Sandeep ;
Bhansali, Anil ;
Shah, Viral N. ;
Madhu, Sri Venkata ;
Marwaha, Raman K. ;
Basu, Analabha ;
Scaria, Vinod ;
McCarthy, Mark I. ;
Venkatesan, Radha ;
Mohan, Viswanathan ;
Tandon, Nikhil ;
Bharadwaj, Dwaipayan .
DIABETES, 2013, 62 (03) :977-986
[29]   Two novel susceptibility loci for type 2 diabetes mellitus identified by longitudinal exome-wide association studies in a Japanese population [J].
Yasukochi, Yoshiki ;
Sakuma, Jun ;
Takeuchi, Ichiro ;
Kato, Kimihiko ;
Oguri, Mitsutoshi ;
Fujimaki, Tetsuo ;
Horibe, Hideki ;
Yamada, Yoshiji .
GENOMICS, 2019, 111 (01) :34-42
[30]   Genome-wide DNA methylation analysis for diabetic nephropathy in type 1 diabetes mellitus [J].
Bell, Christopher G. ;
Teschendorff, Andrew E. ;
Rakyan, Vardhman K. ;
Maxwell, Alexander P. ;
Beck, Stephan ;
Savage, David A. .
BMC MEDICAL GENOMICS, 2010, 3