Population Structure of Finless Porpoise (Neophocaena phocaenoides) Discovered off Coastal Waters, Republic of Korea

被引:2
作者
Ku, Jeong Eun [1 ]
Choi, Seok-Gwan [1 ]
机构
[1] Natl Inst Fisheries Sci, Cetacean Res Inst, Ulsan 44780, South Korea
关键词
finless porpoise; Neophocaena phocaenoides; genetic diversity; population structure; mitochondrial DNA; GENETIC DIVERSITY; CONTROL REGION; MITOCHONDRIAL; PHYLOGEOGRAPHY; HISTORY; JAPAN; ASIAEORIENTALIS; IDENTIFICATION; MANAGEMENT; SOFTWARE;
D O I
10.3390/genes13101701
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The finless porpoise (Neophocaena phocaenoides Cuvier, 1829) is distributed in the coastal waters of Asia, throughout Indonesia to the east, and as far north as the Taiwan Strait. The finless porpoise has been declared critically endangered by the WWF (World Wide Fund for Nature), and in 2017 was rated vulnerable on the IUCN Red Threatened Species List. Since this species is distributed near the coast and has many interactions with humans, effective conservation of the species requires further studies into their genetic diversity and population. In this study, 45 samples were obtained from bycatch or stranded individuals in the East, South, and West Seas, where Korean porpoises were mainly distributed from 2017-2021. We compared 473 bp mtDNA sequences from the control region. Pairwise fixation indices (F-ST) revealed that the two populations differed significantly (F-ST = 0.4557, p = 0.000). In contrast to high levels of genetic differentiation, gene flow was identified as medium levels (Nm of 0.04-0.71). Our data suggest that finless porpoises may have undergone a historic differentiation event, and that finless porpoises in the three regions could be divided into two populations: West and East/South.
引用
收藏
页数:9
相关论文
共 50 条
[21]   Analysis of global and local population stratification of finless porpoises Neophocaena phocaenoides in Chinese waters [J].
Xiang Li ;
Yingying Liu ;
Athanasia C. Tzika ;
Qian Zhu ;
Karine Van Doninck ;
Michel C. Milinkovitch .
Marine Biology, 2011, 158 :1791-1804
[22]   Food habits of finless porpoises (Neophocaena phocaenoides) in Hong Kong waters [J].
Barros, NB ;
Jefferson, TA ;
Parsons, ECM .
RAFFLES BULLETIN OF ZOOLOGY, 2002, :115-123
[23]   Nested clade phylogeographical analysis of the finless porpoise (Neophocaena phocaenoides) inhabiting Chinese and Japanese coasts [J].
Li, L. ;
Jiang, J. ;
Wang, X. ;
Jiang, X. .
GENETICS AND MOLECULAR RESEARCH, 2013, 12 (03) :2528-2536
[24]   Ex situ conservation status of an endangered Yangtze finless porpoise population (Neophocaena phocaenoides asiaeorientalis) as measured from microsatellites and mtDNA diversity [J].
Xia, JH ;
Zheng, JS ;
Wang, D .
ICES JOURNAL OF MARINE SCIENCE, 2005, 62 (08) :1711-1716
[25]   Sequence Polymorphism and Geographical Variation at a Positively Selected MHC-DRB Gene in the Finless Porpoise (Neophocaena phocaenoides): Implication for Recent Differentiation of the Yangtze Finless Porpoise? [J].
Xu, Shixia ;
Ren, Wenhua ;
Zhou, Xuming ;
Zhou, Kaiya ;
Yang, Guang .
JOURNAL OF MOLECULAR EVOLUTION, 2010, 71 (01) :6-22
[26]   Genetic Diversity and Population Structure of the Critically Endangered Yangtze Finless Porpoise (Neophocaena asiaeorientalis asiaeorientalis) as Revealed by Mitochondrial and Microsatellite DNA [J].
Chen, Minmin ;
Zheng, Jinsong ;
Wu, Min ;
Ruan, Rui ;
Zhao, Qingzhong ;
Wang, Ding .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2014, 15 (07) :11307-11323
[27]   A population size estimate of the finless porpoise, Neophocaena phocaenoides, from aerial sighting surveys in Ariake Sound and Tachibana Bay, Japan [J].
Yoshida, H ;
Shirakihara, K ;
Kishino, H ;
Shirakihara, M .
RESEARCHES ON POPULATION ECOLOGY, 1997, 39 (02) :239-247
[28]   Sequence Polymorphism and Geographical Variation at a Positively Selected MHC-DRB Gene in the Finless Porpoise (Neophocaena phocaenoides): Implication for Recent Differentiation of the Yangtze Finless Porpoise? [J].
Shixia Xu ;
Wenhua Ren ;
Xuming Zhou ;
Kaiya Zhou ;
Guang Yang .
Journal of Molecular Evolution, 2010, 71 :6-22
[29]   A genomic scanning using AFLP to detect candidate loci under selection in the finless porpoise (Neophocaena phocaenoides) [J].
Chen, Lian ;
Yang, Guang .
GENES & GENETIC SYSTEMS, 2009, 84 (04) :307-313
[30]   Indo-Pacific humpback dolphins (Sousa chinensis) assist a finless porpoise (Neophocaena phocaenoides sunameri) calf: evidence from Xiamen waters in China [J].
Wang, Xianyan ;
Wu, Fuxing ;
Mou, Jianfeng ;
Zhu, Qian .
JOURNAL OF MAMMALOGY, 2013, 94 (05) :1123-1130