SARS-CoV-2 spike binding to ACE2 is stronger and longer ranged due to glycan interaction
被引:21
作者:
Huang, Yihan
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Univ Calif Davis, Dept Mat Sci, Davis, CA USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Huang, Yihan
[1
]
Harris, Bradley S.
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Harris, Bradley S.
[2
]
Minami, Shiaki A.
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Minami, Shiaki A.
[2
]
Jung, Seongwon
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Jung, Seongwon
[2
]
Shah, Priya S.
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Dept Microbiol & Mol Genet, Davis, CA USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Shah, Priya S.
[2
,3
]
Nandi, Somen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Nandi, Somen
[2
,4
]
McDonald, Karen A.
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
McDonald, Karen A.
[2
,4
]
Faller, Roland
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h-index: 0
机构:
Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Dept Mat Sci, Davis, CA USA
Faller, Roland
[2
]
机构:
[1] Univ Calif Davis, Dept Mat Sci, Davis, CA USA
[2] Univ Calif Davis, Dept Chem Engn, Davis, CA 95616 USA
[3] Univ Calif Davis, Dept Microbiol & Mol Genet, Davis, CA USA
[4] Univ Calif Davis, Global HealthShare Initiat, Davis, CA USA
Highly detailed steered molecular dynamics simulations are performed on differently glycosylated receptor binding domains of the severe acute respiratory syndrome coronavirus-2 spike protein. The binding strength and the binding range increase with glycosylation. The interaction energy rises very quickly when pulling the proteins apart and only slowly drops at larger distances. We see a catch-slip-type behavior whereby interactions during pulling break and are taken over by new interactions forming. The dominant interaction mode is hydrogen bonds, but Lennard-Jones and electrostatic interactions are relevant as well.
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Abraham, Mark James
Murtola, Teemu
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h-index: 0
机构:
Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm University, StockholmTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Murtola, Teemu
Schulz, Roland
论文数: 0引用数: 0
h-index: 0
机构:
Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, 37831, TN
Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, M407 Walters Life Sciences, 1414 Cumberland Avenue, Knoxville, 37996, TNTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Schulz, Roland
Páll, Szilárd
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h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Páll, Szilárd
Smith, Jeremy C.
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h-index: 0
机构:
Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, 37831, TN
Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, M407 Walters Life Sciences, 1414 Cumberland Avenue, Knoxville, 37996, TNTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Smith, Jeremy C.
Hess, Berk
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h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Hess, Berk
Lindah, Erik
论文数: 0引用数: 0
h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm University, StockholmTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
机构:
Scripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Scripps Res Translat Inst, La Jolla, CA 92037 USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Andersen, Kristian G.
Rambaut, Andrew
论文数: 0引用数: 0
h-index: 0
机构:
Univ Edinburgh, Inst Evolutionary Biol, Edinburgh, Midlothian, ScotlandScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Rambaut, Andrew
Lipkin, W. Ian
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Mailman Sch Publ Hlth, Ctr Infect & Immun, New York, NY USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Lipkin, W. Ian
Holmes, Edward C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Sydney, Sch Life & Environm Sci, Marie Bashir Inst Infect Dis & Biosecur, Sydney, NSW, Australia
Univ Sydney, Sch Med Sci, Sydney, NSW, AustraliaScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Holmes, Edward C.
Garry, Robert F.
论文数: 0引用数: 0
h-index: 0
机构:
Tulane Univ, Sch Med, Dept Microbiol & Immunol, New Orleans, LA 70112 USA
Zalgen Labs, Germantown, MD USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
机构:
Department of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, KolkataDepartment of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, Kolkata
Banerjee N.
Mukhopadhyay S.
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h-index: 0
机构:
Department of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, KolkataDepartment of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, Kolkata
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Bernardi, Austen
Huang, Yihan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Mat Sci & Engn, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Huang, Yihan
Harris, Bradley
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Harris, Bradley
Xiong, Yongao
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Xiong, Yongao
Nandi, Somen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Nandi, Somen
McDonald, Karen A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
McDonald, Karen A.
Faller, Roland
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Abraham, Mark James
Murtola, Teemu
论文数: 0引用数: 0
h-index: 0
机构:
Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm University, StockholmTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Murtola, Teemu
Schulz, Roland
论文数: 0引用数: 0
h-index: 0
机构:
Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, 37831, TN
Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, M407 Walters Life Sciences, 1414 Cumberland Avenue, Knoxville, 37996, TNTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Schulz, Roland
Páll, Szilárd
论文数: 0引用数: 0
h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Páll, Szilárd
Smith, Jeremy C.
论文数: 0引用数: 0
h-index: 0
机构:
Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, 37831, TN
Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, M407 Walters Life Sciences, 1414 Cumberland Avenue, Knoxville, 37996, TNTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Smith, Jeremy C.
Hess, Berk
论文数: 0引用数: 0
h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, SolnaTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Hess, Berk
Lindah, Erik
论文数: 0引用数: 0
h-index: 0
机构:
Theoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm University, StockholmTheoretical Biophysics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna
机构:
Scripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Scripps Res Translat Inst, La Jolla, CA 92037 USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Andersen, Kristian G.
Rambaut, Andrew
论文数: 0引用数: 0
h-index: 0
机构:
Univ Edinburgh, Inst Evolutionary Biol, Edinburgh, Midlothian, ScotlandScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Rambaut, Andrew
Lipkin, W. Ian
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Mailman Sch Publ Hlth, Ctr Infect & Immun, New York, NY USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Lipkin, W. Ian
Holmes, Edward C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Sydney, Sch Life & Environm Sci, Marie Bashir Inst Infect Dis & Biosecur, Sydney, NSW, Australia
Univ Sydney, Sch Med Sci, Sydney, NSW, AustraliaScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
Holmes, Edward C.
Garry, Robert F.
论文数: 0引用数: 0
h-index: 0
机构:
Tulane Univ, Sch Med, Dept Microbiol & Immunol, New Orleans, LA 70112 USA
Zalgen Labs, Germantown, MD USAScripps Res Inst, Dept Immunol & Microbiol, La Jolla, CA 92037 USA
机构:
Department of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, KolkataDepartment of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, Kolkata
Banerjee N.
Mukhopadhyay S.
论文数: 0引用数: 0
h-index: 0
机构:
Department of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, KolkataDepartment of Laboratory Medicine, School of Tropical Medicine, 108, C.R Avenue, Kolkata
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Bernardi, Austen
Huang, Yihan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Mat Sci & Engn, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Huang, Yihan
Harris, Bradley
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Harris, Bradley
Xiong, Yongao
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Xiong, Yongao
Nandi, Somen
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
Nandi, Somen
McDonald, Karen A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USA
Univ Calif Davis, Global HealthShare Initiat, Davis, CA USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA
McDonald, Karen A.
Faller, Roland
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Davis, Chem Engn, Davis, CA 95616 USAUniv Calif Davis, Chem Engn, Davis, CA 95616 USA