An evolutionary computational approach to the phase problem in macromolecular X-ray crystallography

被引:11
作者
Webster, G [1 ]
Hilgenfeld, R [1 ]
机构
[1] Inst Mol Biotechnol, Dept Struct Biol & Crystallog, D-07745 Jena, Germany
来源
ACTA CRYSTALLOGRAPHICA SECTION A | 2001年 / 57卷
关键词
D O I
10.1107/S0108767301000496
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The ab initio computation of the molecular envelopes of two proteins exclusively from their corresponding diffraction amplitudes demonstrates that an efficient and inherently parallel evolutionary search algorithm can assist in the direct phasing of macromolecules for which almost no a priori structural information is available. The applicability of this evolutionary computational approach is general and should not be limited to the examples described nor to extremes of data resolution, symmetry or structural size.
引用
收藏
页码:351 / 358
页数:8
相关论文
共 27 条
[1]  
Back T., 1997, B EATCS, V63, P161
[2]   CRYSTAL-STRUCTURE OF ACTIVE ELONGATION-FACTOR TU REVEALS MAJOR DOMAIN REARRANGEMENTS [J].
BERCHTOLD, H ;
RESHETNIKOVA, L ;
REISER, COA ;
SCHIRMER, NK ;
SPRINZL, M ;
HILGENFELD, R .
NATURE, 1993, 365 (6442) :126-132
[3]   A ComDarison of Selection Schemes Used in Evolutionary Algorithms [J].
Blickle, Tobias ;
Thiele, Lothar .
EVOLUTIONARY COMPUTATION, 1996, 4 (04) :361-394
[4]   DIRECT PHASE DETERMINATION BY ENTROPY MAXIMIZATION AND LIKELIHOOD RANKING - STATUS-REPORT AND PERSPECTIVES [J].
BRICOGNE, G .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1993, 49 :37-60
[5]   USING GENETIC ALGORITHMS FOR SOLVING HEAVY-ATOM SITES [J].
CHANG, G ;
LEWIS, M .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :667-674
[6]  
Connor R., 1994, PRACTICAL HDB GENETI, P57
[7]  
DRENTH J, 1994, PRINCIPLES PROTEIN X, P161
[8]  
FORTHOFER RN, 1995, INTRO BIOSTATISTICS, P128
[9]  
Hauptman H., 1953, AM CRYSTALLOGRAPHIC, V3
[10]   The SAS maximal principle: A new approach to the phase problem [J].
Hauptman, HA .
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 1996, 52 :490-496