Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation

被引:66
作者
Danelius, Emma [1 ]
Andersson, Hanna [1 ]
Jarvoll, Patrik [1 ]
Lood, Kajsa [1 ]
Grafenstein, Jurgen [1 ]
Erdelyi, Mate [1 ,2 ]
机构
[1] Univ Gothenburg, Dept Chem & Mol Biol, SE-41296 Gothenburg, Sweden
[2] Swedish NMR Ctr, Med Aregatan 5, SE-41390 Gothenburg, Sweden
基金
瑞典研究理事会; 欧洲研究理事会;
关键词
BETA-HAIRPIN STABILITY; STRUCTURAL DETERMINANTS; MEDICINAL CHEMISTRY; AMINO-ACIDS; PROTEIN; MODEL; NMR; PROPENSITIES; RECOGNITION; MOLECULES;
D O I
10.1021/acs.biochem.7b00429
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivated by this fact, we have developed a peptide model system that permits the quantitative evaluation of weak forces in a biologically relevant proteinlike environment and have applied it for the assessment of a halogen bond formed between two amino acid side chains. The influence of a single weak force is measured by detection of the extent to which it modulates the conformation of a cooperatively folding system. We have optimized the amino acid sequence of the model peptide on analogues with a hydrogen bond-forming site as a model for the intramolecular halogen bond to be studied, demonstrating the ability of the technique to provide information about any type of weak secondary interaction. A combined solution nuclear magnetic resonance spectroscopic and computational investigation demonstrates that an interstrand halogen bond is capable of conformational stabilization of a beta-hairpin foldamer comparable to an analogous hydrogen bond. This is the first report of incorporation of a conformation-stabilizing halogen bond into a peptide/protein system, and the first quantification of a chlorine-centered halogen bond in a biologically relevant system in solution.
引用
收藏
页码:3265 / 3272
页数:8
相关论文
共 53 条
[51]   A Facile and Efficient One-Pot Synthesis of Substituted Quinolines from α-Arylamino Ketones Under Vilsmeier Conditions [J].
Wang, Yan ;
Xin, Xin ;
Liang, Yongjiu ;
Lin, Yingjie ;
Zhang, Rui ;
Dong, Dewen .
EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 2009, 2009 (24) :4165-4169
[52]   Principles and Applications of Halogen Bonding in Medicinal Chemistry and Chemical Biology [J].
Wilcken, Rainer ;
Zimmermann, Markus O. ;
Lange, Andreas ;
Joerger, Andreas C. ;
Boeckler, Frank M. .
JOURNAL OF MEDICINAL CHEMISTRY, 2013, 56 (04) :1363-1388
[53]   RELATIONSHIP BETWEEN NUCLEAR-MAGNETIC-RESONANCE CHEMICAL-SHIFT AND PROTEIN SECONDARY STRUCTURE [J].
WISHART, DS ;
SYKES, BD ;
RICHARDS, FM .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 222 (02) :311-333