Recent advances of functional nucleic acid-based sensors for point-of-care detection of SARS-CoV-2

被引:20
作者
Zhang, Wenxian [1 ]
He, Ying [1 ]
Feng, Zhe [1 ]
Zhang, Jingjing [1 ]
机构
[1] Nanjing Univ, Sch Chem & Chem Engn, Chem & Biomed Innovat Ctr ChemBIC, State Key Lab Analyt Chem Life Sci, Nanjing 210023, Peoples R China
基金
中国国家自然科学基金;
关键词
Aptamer; Nucleic acid enzyme; COVID-19; Nanomaterial; Portable analyzer; RECOMBINASE POLYMERASE AMPLIFICATION; COVID-19; DIAGNOSIS; APTAMER; EVOLUTION; ANTIGEN;
D O I
10.1007/s00604-022-05242-4
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
This review focuses on critical scientific barriers that the field of point-of-care (POC) testing of SARS-CoV-2 is facing and possible solutions to overcome these barriers using functional nucleic acid (FNA)-based technology. Beyond the summary of recent advances in FNA-based sensors for COVID-19 diagnostics, our goal is to outline how FNA might serve to overcome the scientific barriers that currently available diagnostic approaches are suffering. The first introductory section on the operationalization of the COVID-19 pandemic in historical view and its clinical features contextualizes essential SARS-CoV-2-specific biomarkers. The second part highlights three major scientific barriers for POC COVID-19 diagnosis, that is, the lack of a general method for (1) designing receptors of SARS-CoV-2 variants; (2) improving sensitivity to overcome false negatives; and (3) signal readout in resource-limited settings. The subsequent part provides fundamental insights into FNA and technical tricks to successfully achieve effective COVID-19 diagnosis by using in vitro selection of FNA to overcome receptor design barriers, combining FNA with multiple DNA signal amplification strategies to improve sensitivity, and interfacing FNA with portable analyzers to overcome signal readout barriers. This review concludes with an overview of further opportunities and emerging applications for FNA-based sensors against COVID-19.
引用
收藏
页数:18
相关论文
共 75 条
[1]   HRPZyme Assisted Recognition of SARS-CoV-2 infection by Optical Measurement (HARIOM) [J].
Ahmad, Mohd ;
Sharma, Pooja ;
Kamai, Asangla ;
Agrawal, Anurag ;
Faruq, Mohammed ;
Kulshreshtha, Ankur .
BIOSENSORS & BIOELECTRONICS, 2021, 187
[2]  
Ali OH, 2021, CLIN INFECT DIS, V73, pE2869, DOI 10.1093/cid/ciaa1496
[3]   Review on the coronavirus disease (COVID-19) pandemic: Its outbreak and current status [J].
Almaghaslah, Dalia ;
Kandasamy, Geetha ;
Almanasef, Mona ;
Vasudevan, Rajalakshimi ;
Chandramohan, Sriram .
INTERNATIONAL JOURNAL OF CLINICAL PRACTICE, 2020, 74 (11)
[4]   Functional nucleic acids as in vivo metabolite and ion biosensors [J].
Alsaafin, Alaa ;
McKeague, Maureen .
BIOSENSORS & BIOELECTRONICS, 2017, 94 :94-106
[5]   Visual Detection of SARS-CoV-2 RNA by Conventional PCR-Induced Generation of DNAzyme Sensor [J].
Anantharaj, Anbalagan ;
Das, Soon Jyoti ;
Sharanabasava, Patil ;
Lodha, Rakesh ;
Kabra, Sushil K. ;
Sharma, Tarun Kumar ;
Medigeshi, Guruprasad R. .
FRONTIERS IN MOLECULAR BIOSCIENCES, 2020, 7
[6]   Fast, accurate, point-of-care COVID-19 pandemic diagnosis enabled through advanced lab-on-chip optical biosensors: Opportunities and challenges [J].
Asghari, Aref ;
Wang, Chao ;
Yoo, Kyoung Min ;
Rostamian, Ali ;
Xu, Xiaochuan ;
Shin, Jong-Dug ;
Dalir, Hamed ;
Chen, Ray T. .
APPLIED PHYSICS REVIEWS, 2021, 8 (03)
[7]   Rapid Point-of-Care COVID-19 Diagnosis with a Gold-Nanoarchitecture-Assisted Laser-Scribed Graphene Biosensor [J].
Beduk, Tutku ;
Beduk, Duygu ;
de Oliveira Filho, Jose Ilton ;
Zihnioglu, Figen ;
Cicek, Candan ;
Sertoz, Ruchan ;
Arda, Bilgin ;
Goksel, Tuncay ;
Turhan, Kutsal ;
Salama, Khaled N. ;
Timur, Suna .
ANALYTICAL CHEMISTRY, 2021, 93 (24) :8585-8594
[8]   Gold nanoparticle based plasmonic sensing for the detection of SARS-CoV-2 nucleocapsid proteins [J].
Behrouzi, Kamyar ;
Lin, Liwei .
BIOSENSORS & BIOELECTRONICS, 2022, 195
[9]   Surface plasmon resonance aptasensor based on niobium carbide MXene quantum dots for nucleocapsid of SARS-CoV-2 detection [J].
Chen, Rongyuan ;
Kan, Lun ;
Duan, Fenghe ;
He, Linghao ;
Wang, Minghua ;
Cui, Jing ;
Zhang, Zhihong ;
Zhang, Zhonghou .
MICROCHIMICA ACTA, 2021, 188 (10)
[10]   A mask-based diagnostic platform for point-of-care screening of Covid-19 [J].
Daniels, John ;
Wadekar, Shekhar ;
DeCubellis, Ken ;
Jackson, George W. ;
Chiu, Alexander S. ;
Pagneux, Quentin ;
Saada, Hiba ;
Engelmann, Ilka ;
Ogiez, Judith ;
Loze-Warot, Delphine ;
Boukherroub, Rabah ;
Szunerits, Sabine .
BIOSENSORS & BIOELECTRONICS, 2021, 192