Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

被引：3618

作者：

Letunic, Ivica ^{[1
]}

Bork, Peer ^{[2
,3
,4
]}

机构：

[1] Biobyte Solut GmbH, Bothestr 142, D-69126 Heidelberg, Germany

[2] European Mol Biol Lab, Meyerhofstr 1, D-69117 Heidelberg, Germany

[3] Max Delbruck Ctr Mol Med, D-13125 Berlin, Germany

[4] Univ Wurzburg, Dept Bioinformat, Bioctr, D-97074 Wurzburg, Germany

来源：

NUCLEIC ACIDS RESEARCH | 2016年 / 44卷 / W1期

关键词：

MAXIMUM-LIKELIHOOD; PLACEMENT;

D O I：

10.1093/nar/gkw290

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Interactive Tree Of Life (http://itol.embl.de) is a webbased tool for the display, manipulation and annotation of phylogenetic trees. It is freely available and open to everyone. The current version was completely redesigned and rewritten, utilizing current web technologies for speedy and streamlined processing. Numerous new features were introduced and several new data types are now supported. Trees with up to 100,000 leaves can now be efficiently displayed. Full interactive control over precise positioning of various annotation features and an unlimited number of datasets allow the easy creation of complex tree visualizations. iTOL 3 is the first tool which supports direct visualization of the recently proposed phylogenetic placements format. Finally, iTOL's account system has been redesigned to simplify the management of trees in user-defined workspaces and projects, as it is heavily used and currently handles already more than 500,000 trees from more than 10,000 individual users.

引用

页码：W242 / W245

页数：4

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