Identification and discrimination of bacterial strains by laser induced breakdown spectroscopy and neural networks

被引:62
作者
Marcos-Martinez, D. [1 ]
Ayala, J. A. [2 ]
Izquierdo-Hornillos, R. C. [1 ]
Manuel de Villena, F. J. [1 ]
Caceres, J. O. [1 ]
机构
[1] Univ Complutense, Fac Ciencias Quim, Dept Quim Analit, E-28040 Madrid, Spain
[2] CSIC, Ctr Biol Mol Severo Ochoa, E-28049 Madrid, Spain
关键词
Laser induced breakdown spectroscopy; Neural networks; Bacteria; CLASSIFICATION;
D O I
10.1016/j.talanta.2011.01.069
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
A method based on laser induced breakdown spectroscopy (LIBS) and neural networks (NNs) has been developed and applied to the identification and discrimination of specific bacteria strains (Pseudomonas aeroginosa, Escherichia coli and Salmonella typhimurium). Instant identification of the samples is achieved using a spectral library, which was obtained by analysis using a single laser pulse of representative samples and treatment by neural networks. The samples used in this study were divided into three groups, which were prepared on three different days. The results obtained allow the identification of the bacteria tested with a certainty of over 95%, and show that only a difference between the bacteria can cause identification. Single-shot measurements were sufficient for clear identification of the bacterial strains studied. The method can be developed for automatic real time, fast, reliable and robust measurements and can be packaged in portable systems for non-specialist users. (C) 2011 Elsevier B.V. All rights reserved.
引用
收藏
页码:730 / 737
页数:8
相关论文
共 29 条
[1]  
[Anonymous], 2005, NEURAL NETWORKS PATT
[2]  
[Anonymous], 2006, Handbook of Laser-Induced Breakdown Spectroscopy
[3]   Time-resolved ultraviolet laser-induced breakdown spectroscopy for organic material analysis [J].
Baudelet, Matthieu ;
Boueri, Myriam ;
Yu, Jin ;
Mao, Samuel S. ;
Piseltelli, Vincent ;
Mao, Xianglei ;
Russo, Richard E. .
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY, 2007, 62 (12) :1329-1334
[4]   Quantitative analysis of trace metal ions in ice using laser-induced breakdown spectroscopy [J].
Cáceres, JO ;
López, JT ;
Telle, HH ;
Ureña, AG .
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY, 2001, 56 (06) :831-838
[5]  
Demuth H., 2007, NEURAL NETWORK TOOLB
[6]   An introduction to ROC analysis [J].
Fawcett, Tom .
PATTERN RECOGNITION LETTERS, 2006, 27 (08) :861-874
[7]   A simple generalisation of the area under the ROC curve for multiple class classification problems [J].
Hand, DJ ;
Till, RJ .
MACHINE LEARNING, 2001, 45 (02) :171-186
[8]   Laser-induced breakdown spectroscopy detection and classification of biological aerosols [J].
Hybl, JD ;
Lithgow, GA ;
Buckley, SG .
APPLIED SPECTROSCOPY, 2003, 57 (10) :1207-1215
[9]   A comparative study of laser induced breakdown spectroscopy analysis for element concentrations in aluminum alloy using artificial neural networks and calibration methods [J].
Inakollu, Prasanthi ;
Philip, Thomas ;
Rai, Awadhesh K. ;
Yueh, Fang-Yu ;
Singh, Jagdish P. .
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY, 2009, 64 (01) :99-104
[10]   Techniques for evaluating fault prediction models [J].
Jiang, Yue ;
Cukic, Bojan ;
Ma, Yan .
EMPIRICAL SOFTWARE ENGINEERING, 2008, 13 (05) :561-595