Computational modelling with functional differential equations: Identification, selection, and sensitivity

被引:19
作者
Baker, CTH [1 ]
Bocharov, GA [1 ]
Paul, CAH [1 ]
Rihan, FA [1 ]
机构
[1] Univ Manchester, Dept Math, Manchester M13 9PL, Lancs, England
关键词
computation; data; differential equations; identifiability; information-theoretic criteria; modelling; objective function; parametric estimation; sensitivity; time-lag; well-posedness;
D O I
10.1016/j.apnum.2004.08.014
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
Mathematical models based upon certain types of differential equations, functional differential equations, or systems of such equations, are often employed to represent the dynamics of natural, in particular biological, phenomena. We present some of the principles underlying the choice of a methodology (based on observational data) for the computational identification of, and discrimination between, quantitatively consistent models, using scientifically meaningful parameters. We propose that a computational approach is essential for obtaining meaningful models. For example, it permits the choice of realistic models incorporating a time-lag which is entirely natural from the scientific perspective. The time-lag is a feature that can permit a close reconciliation between models incorporating computed parameter values and observations. Exploiting the link between information theory, maximum likelihood, and weighted least squares, and with distributional assumptions on the data errors, we may construct an appropriate objective function to be minimized computationally. The minimizer is sought over a set of parameters (which may include the timelag) that define the model. Each evaluation of the objective function requires the computational solution of the parametrized equations defining the model. To select a parametrized model, from amongst a family or hierarchy of possible best-fit models, we are able to employ certain indicators based on information-theoretic criteria. We can evaluate confidence intervals for the parameters, and a sensitivity analysis provides an expression for an information matrix, and feedback on the covariances of the parameters in relation to the best fit. This gives a firm basis for any simplification of the model (e.g., by omitting a parameter). (c) 2004 IMACS. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:107 / 129
页数:23
相关论文
共 53 条
  • [1] NEW LOOK AT STATISTICAL-MODEL IDENTIFICATION
    AKAIKE, H
    [J]. IEEE TRANSACTIONS ON AUTOMATIC CONTROL, 1974, AC19 (06) : 716 - 723
  • [2] ANDERSON DH, 1983, LECTURE NOTES BIOMAT, V50
  • [3] ANDERSON R M, 1991
  • [4] APPLETON DR, 1997, J THEOR MED, V1, P53
  • [5] Armitage P, 2001, STAT METHODS MED RES
  • [6] Global identifiability of linear compartmental models -: A computer algebra algorithm
    Audoly, S
    D'Angiò, L
    Saccomani, MP
    Cobelli, C
    [J]. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 1998, 45 (01) : 36 - 47
  • [7] Global identifiability of nonlinear models of biological systems
    Audoly, S
    Bellu, G
    D'Angiò, L
    Saccomani, MP
    Cobelli, C
    [J]. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2001, 48 (01) : 55 - 65
  • [8] Bailey N. T. J., 1975, The mathematical theory of infectious diseases and its applications, V2nd
  • [9] Pitfalls in parameter estimation for delay differential equations
    Baker, C
    Paul, CAH
    [J]. SIAM JOURNAL ON SCIENTIFIC COMPUTING, 1997, 18 (01) : 305 - 314
  • [10] Modelling and analysis of time-lags in some basic patterns of cell proliferation
    Baker, CTH
    Bocharov, GA
    Paul, CAH
    Rihan, FA
    [J]. JOURNAL OF MATHEMATICAL BIOLOGY, 1998, 37 (04) : 341 - 371