Isolation strategies of marine-derived actinomycetes from sponge and sediment samples

被引:38
作者
Hames-Kocabas, E. Esin [1 ]
Uzel, Atac [2 ]
机构
[1] Ege Univ, Dept Bioengn, Fac Engn, TR-35100 Izmir, Turkey
[2] Ege Univ, Fac Sci, Dept Biol, TR-35100 Izmir, Turkey
关键词
Marine actinomycetes; High-throughput cultivation; Isolation; Sediment; Sponge; IN-SITU CULTIVATION; PHYLOGENETIC DIVERSITY; CULTURABLE ACTINOBACTERIA; DILUTION CULTURE; TRONDHEIM FJORD; BACTERIA; MICROORGANISMS; GROWTH; WIDESPREAD; NORWAY;
D O I
10.1016/j.mimet.2012.01.010
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
During the last two decades, discoveries of new members of actinomycetes and novel metabolites from marine environments have drawn attention to such environments, such as sediment and sponge. For the successful isolation of actinomycetes from marine environments, many factors including the use of enrichment and pre-treatment techniques, and the selection of growth media and antibiotic supplements should be taken into account. High-throughput cultivation is an innovative technique that mimics nature, eliminates undesired, fast-growing bacteria and creates suitable conditions for rare, slow-growing actinomycetes. This review comprehensively evaluates the traditional and innovative techniques and strategies used for the isolation of actinomycetes from marine sponge and sediment samples. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:342 / 347
页数:6
相关论文
共 53 条
  • [1] Isolation, Phylogenetic Analysis and Anti-infective Activity Screening of Marine Sponge-Associated Actinomycetes
    Abdelmohsen, Usama Ramadan
    Pimentel-Elardo, Sheila M.
    Hanora, Amro
    Radwan, Mona
    Abou-El-Ela, Soad H.
    Ahmed, Safwat
    Hentschel, Ute
    [J]. MARINE DRUGS, 2010, 8 (03) : 399 - 412
  • [2] PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION
    AMANN, RI
    LUDWIG, W
    SCHLEIFER, KH
    [J]. MICROBIOLOGICAL REVIEWS, 1995, 59 (01) : 143 - 169
  • [3] Baltz R.H., 2005, SIM News, V55, P186
  • [4] Rare actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway:: isolation, diversity and biological activity
    Bredholdt, Harald
    Galatenko, Olga A.
    Engelhardt, Kerstin
    Fjaervik, Espen
    Terekhova, Larissa P.
    Zotchev, Sergey B.
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2007, 9 (11) : 2756 - 2764
  • [5] Bredholt H, 2008, MAR DRUGS, V6, P12, DOI 10.3390/md6010012
  • [6] A novel approach for high throughput cultivation assays and the isolation of planktonic bacteria
    Bruns, A
    Hoffelner, H
    Overmann, J
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2003, 45 (02) : 161 - 171
  • [7] VIABILITY AND ISOLATION OF MARINE-BACTERIA BY DILUTION CULTURE - THEORY, PROCEDURES, AND INITIAL RESULTS
    BUTTON, DK
    SCHUT, F
    QUANG, P
    MARTIN, R
    ROBERTSON, BR
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (03) : 881 - 891
  • [8] Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria
    Cho, JC
    Giovannoni, SJ
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (01) : 432 - 440
  • [9] Novel rhodococci and other mycolate actinomycetes from the deep sea
    Colquhoun, JA
    Mexson, J
    Goodfellow, M
    Ward, AC
    Horikoshi, K
    Bull, AT
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 1998, 74 (1-3): : 27 - 40
  • [10] High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates
    Connon, SA
    Giovannoni, SJ
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (08) : 3878 - 3885