Genome Sequence of Paenibacillus terrae HPL-003, a Xylanase-Producing Bacterium Isolated from Soil Found in Forest Residue

被引：23

作者：

Shin, Sang Heum ^{[1
]}

Kim, Sewhan ^{[1
]}

Kim, Jae Young ^{[1
]}

Song, Ha Young ^{[2
]}

Cho, Soo Jin ^{[2
]}

Kim, Dal Rye ^{[2
]}

Lee, Kee-In ^{[2
]}

Lim, Hee Kyung ^{[2
]}

Park, No-Joong ^{[2
]}

Hwang, In Taek ^{[2
]}

Yang, Kap-Seok ^{[1
]}

机构：

[1] Macrogen Inc, Seoul, South Korea

[2] Korea Res Inst Chem Technol, Biorefinery Res Ctr, Green Chem Div, Taejon 305606, South Korea

来源：

JOURNAL OF BACTERIOLOGY | 2012年 / 194卷 / 05期

关键词：

D O I：

10.1128/JB.06668-11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

This article reports on the full genome sequence of Paenibacillus terrae HPL-003, which is a Gram-positive, endospore-forming, xylanase-producing bacterium isolated from soil found in forest residue on Gara Mountain. The strain HPL-003 contains 6,083,395 bp with a G+C content of 46.77 mol%, 2,633 protein-coding genes, and 117 structural RNAs.

引用

页码：1266 / 1266

页数：1

共 11 条

[1]

Adrio Jose-Luis, 2010, Bioeng Bugs, V1, P116, DOI 10.4161/bbug.1.2.10484

[2] EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences [J].

Chun, Jongsik ;

Lee, Jae-Hak ;

Jung, Yoonyoung ;

Kim, Myungjin ;

Kim, Seil ;

Kim, Byung Kwon ;

Lim, Young-Woon .

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :2259-2261

[3]

Howard R. L., 2003, African Journal of Biotechnology, V2, P602

[4] The enhancement of enzymatic hydrolysis of lignocellulosic substrates by the addition of accessory enzymes such as xylanase: is it an additive or synergistic effect? [J].

Hu, Jinguang ;

Arantes, Valdeir ;

Saddler, Jack N. .

BIOTECHNOLOGY FOR BIOFUELS, 2011, 4

[5]

Hwang IT, 2011, Patent No. [PCT/KR2011/005966, 2011005966]

[6] Genome sequencing in microfabricated high-density picolitre reactors [J].

Margulies, M ;

Egholm, M ;

Altman, WE ;

Attiya, S ;

Bader, JS ;

Bemben, LA ;

Berka, J ;

Braverman, MS ;

Chen, YJ ;

Chen, ZT ;

Dewell, SB ;

Du, L ;

Fierro, JM ;

Gomes, XV ;

Godwin, BC ;

He, W ;

Helgesen, S ;

Ho, CH ;

Irzyk, GP ;

Jando, SC ;

Alenquer, MLI ;

Jarvie, TP ;

Jirage, KB ;

Kim, JB ;

Knight, JR ;

Lanza, JR ;

Leamon, JH ;

Lefkowitz, SM ;

Lei, M ;

Li, J ;

Lohman, KL ;

Lu, H ;

Makhijani, VB ;

McDade, KE ;

McKenna, MP ;

Myers, EW ;

Nickerson, E ;

Nobile, JR ;

Plant, R ;

Puc, BP ;

Ronan, MT ;

Roth, GT ;

Sarkis, GJ ;

Simons, JF ;

Simpson, JW ;

Srinivasan, M ;

Tartaro, KR ;

Tomasz, A ;

Vogt, KA ;

Volkmer, GA .

NATURE, 2005, 437 (7057) :376-380

[7] Cellulase-Xylanase Synergy in Designer Cellulosomes for Enhanced Degradation of a Complex Cellulosic Substrate [J].

Morais, Sarah ;

Barak, Yoav ;

Caspi, Jonathan ;

Hadar, Yitzhak ;

Lamed, Raphael ;

Shoham, Yuval ;

Wilson, David B. ;

Bayer, Edward A. .

MBIO, 2010, 1 (05)

[8] Overcoming the Recalcitrance for the Conversion of Kenaf Pulp to Glucose via Microwave-Assisted Pre-Treatment Processes [J].

Ooi, Beng Guat ;

Rambo, Ashley L. ;

Hurtado, Miguel A. .

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2011, 12 (03) :1451-1463

[9] NCBI Reference Sequences: current status, policy and new initiatives [J].

Pruitt, Kim D. ;

Tatusova, Tatiana ;

Klimke, William ;

Maglott, Donna R. .

NUCLEIC ACIDS RESEARCH, 2009, 37 :D32-D36

[10] Selection of Conditions for Cellulase and Xylanase Extraction from Switchgrass Colonized by Acidothermus cellulolyticus [J].

Rezaei, Farzaneh ;

Joh, Lawrence D. ;

Kashima, Hiroyuki ;

Reddy, Amitha P. ;

VanderGheynst, Jean S. .

APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2011, 164 (06) :793-803

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