Synthesis, X-ray crystallography, molecular electronic property investigation, and leukopoiesis activity of novel 4,6-dimethyl-1,6-dihydropyridin-2-amino nitrate hybrid material

被引:18
作者
Jaziri, Emna [1 ]
Louis, Hitler [2 ]
Gharbi, Chaima [1 ]
Unimuke, Tomsmith O. [2 ]
Agwamba, Ernest C. [2 ,3 ]
Mathias, Gideon E. [2 ]
Fugita, Wataru [4 ]
Ben Nasr, Cherif [1 ]
Khedhiri, Lamia [5 ]
机构
[1] Univ Carthage, Fac Sci Bizerte, Lab Chim Mat, Zarzouna 7021, Tunisia
[2] Univ Calabar, Computat & Biosimulat Res Grp, Calabar, Nigeria
[3] Clifford Univ, Dept Chem Sci, Owerrinta, Nigeria
[4] Tokyo Univ Marine Sci & Technol, Fac Marine Engn, Dept Marine Elect & Mech Engn, Tokyo 1358533, Japan
[5] Inst Natl Rech & Anal Physico Chim INRAP, Lab Mat Utiles, Ariana 2020, Tunisia
关键词
X-ray diffraction study; Natural bond orbital; Molecular docking; Molecular electronic properties; Leukopoiesis stimulant; INTERMOLECULAR INTERACTIONS; CRYSTAL-STRUCTURE; DOCKING; ATOMS;
D O I
10.1016/j.molstruc.2022.133733
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Herein, a new hybrid organic-inorganic material: 4,6-dimethyl-1,6-dihydropyridin-2-amino nitrate (I) has been synthesized and characterized by X-ray diffraction technique and Fourier transform infrared (FT-IR) spectroscopy. The structural, electronic and topological properties were investigated by a theoretical approach along with a validation of vibrational properties using the dispersion-corrected density func-tional theory (DFT-D3) method (PWPB95 D3(BJ)) along with the meta-generalized gradient approximation (Meta-GGA) functional of the Minnesota family (M06-2x). All computations were conducted with the 6- 311 ++G(2df,2pd) and def2-TZVP basis set. A visual study of weak interactions was achieved via Bader's Quantum theory of atoms in molecules (QTAIM), non-covalent interaction (NCI) using the promolecular electron density approach, Electron localization function and molecular electrostatic potential. Natural or-bital analysis and charge delocalization were equally considered to comprehend and appraise the various intermolecular stabilization mechanisms in the studied system. Molecular electronic properties (quantum descriptors) were also investigated to assess the reactive nature and stability index of the synthesized structure. Due to the ionic nature and structural similarity of the studied compound with methyluracil, molecular docking investigations of the Leukopoiesis stimulating activity of (I) were assessed and com-pared with a series of Krebs 'regulating enzymes. These studies divulged that the synthesized compound has the potential to stimulate the synthesis of nucleic acids, proteins, cell division, and leukopoiesis.(c) 2022 Elsevier B.V. All rights reserved.
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页数:17
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