Guidelines for Sanger sequencing and molecular assay monitoring

被引:110
作者
Crossley, Beate M. [1 ]
Bai, Jianfa [3 ]
Glaser, Amy [2 ]
Maes, Roger [6 ]
Porter, Elizabeth [3 ]
Killian, Mary Lea [4 ]
Clement, Travis [5 ]
Toohey-Kurth, Kathy [1 ]
机构
[1] Univ Calif, Calif Anim Hlth & Food Safety Lab, POB 1770, Davis, CA 95616 USA
[2] Cornell Univ, Dept Populat Med & Diagnost Sci, Ithaca, NY USA
[3] Kansas State Univ, Kansas State Vet Diagnost Lab, Manhattan, KS 66506 USA
[4] Natl Vet Serv Labs, Ames, IA USA
[5] South Dakota State Univ, Anim Dis Res & Diagnost Lab, Brookings, SD 57007 USA
[6] Michigan State Univ, Vet Diagnost Lab, Lansing, MI USA
关键词
quality score; Sanger sequencing; validation; RAPID METHOD; DNA; ARTIFACTS; FRAGMENTS;
D O I
10.1177/1040638720905833
中图分类号
S85 [动物医学(兽医学)];
学科分类号
0906 ;
摘要
Genetic sequencing, or DNA sequencing, using the Sanger technique has become widely used in the veterinary diagnostic community. This technology plays a role in verification of PCR results and is used to provide the genetic sequence data needed for phylogenetic analysis, epidemiologic studies, and forensic investigations. The Laboratory Technology Committee of the American Association of Veterinary Laboratory Diagnosticians has prepared guidelines for sample preparation, submission to sequencing facilities or instrumentation, quality assessment of nucleic acid sequence data performed, and for generating basic sequencing data and phylogenetic analysis for diagnostic applications. This guidance is aimed at assisting laboratories in providing consistent, high-quality, and reliable sequence data when using Sanger-based genetic sequencing as a component of their laboratory services.
引用
收藏
页码:767 / 775
页数:9
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