Low expression of LOC285194 is associated with poor prognosis in colorectal cancer

被引:129
作者
Qi, Peng [1 ,2 ,3 ]
Xu, Mi-die [1 ,2 ,3 ]
Ni, Shu-juan [1 ,2 ,3 ]
Huang, Dan [1 ,2 ,3 ]
Wei, Ping [1 ,2 ,3 ]
Tan, Cong [1 ,2 ,3 ]
Zhou, Xiao-yan [1 ,2 ,3 ]
Du, Xiang [1 ,2 ,3 ,4 ]
机构
[1] Fudan Univ, Shanghai Canc Ctr, Dept Pathol, Shanghai 200032, Peoples R China
[2] Fudan Univ, Shanghai Med Coll, Dept Oncol, Shanghai 200032, Peoples R China
[3] Fudan Univ, Inst Pathol, Shanghai 200032, Peoples R China
[4] Fudan Univ, Inst Biomed Sci, Shanghai 200032, Peoples R China
关键词
Colorectal cancer; Long non-coding RNAs; LOC285194; Survival; LONG NONCODING RNAS; MALAT-1; GAS5; GENE;
D O I
10.1186/1479-5876-11-122
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Background: The long non-coding RNAs (lncRNAs) study has gradually become one of the hot topics in the field of RNA biology. One lncRNA which has attracted attention is LOC285194, a lncRNA demonstrated the potential tumor-suppressor role in osteosarcoma. The aim of this study was to examine the expression of LOC285194 in colorectal cancer (CRC) patients and to investigate the relationship between this lncRNA levels and existing clinicopathologic parameters and patient survival. Methods: The expression of LOC285194 was detected by quantitative real-time polymerase chain reaction in pairs of tumorous and adjacent normal tissues of 81 colorectal cancer patients with a follow-up of 5 years, as well as in three colorectal cancer cell lines and normal intestinal mucous cell line. Then, we analyzed the potential relationship between this lncRNA levels in tumor tissues and existing clinicopathological features of CRC, and clinical outcome. Results: The relative expression levels of LOC285194 was significantly lower in tumor tissues (p < 0.001) and colorectal cancer cell lines compared with adjacent normal tissues and normal intestinal mucous cell line. In addition, low expression of LOC285194 was correlated with larger tumor size (p = 0.015), higher tumor stage (p = 0.034), and more distant metastasis (p = 0.046). Kaplan-Meier analysis indicated that patients with low LOC285194 expression had a poor disease free survival (p = 0.010). Moreover, multivariate analysis showed that decreased expression of LOC285194 was an independent predictor of disease-specific survival. Conclusion: Our data indicate that LOC285194 might be a novel prognostic indicator in colorectal cancer and may be a potential target for diagnosis and gene therapy.
引用
收藏
页数:7
相关论文
共 28 条
[1]   Prognostic significance of drug-regulated genes in high-grade osteosarcoma [J].
Fellenberg, Joerg ;
Bernd, Ludger ;
Delling, Guenter ;
Witte, Daniela ;
Zahlten-Hinguranage, Anita .
MODERN PATHOLOGY, 2007, 20 (10) :1085-1094
[2]   The functional role of long non-coding RNA in human carcinomas [J].
Gibb, Ewan A. ;
Brown, Carolyn J. ;
Lam, Wan L. .
MOLECULAR CANCER, 2011, 10
[3]   A transcriptional sketch of a primary human breast cancer by 454 deep sequencing [J].
Guffanti, Alessandro ;
Iacono, Michele ;
Pelucchi, Paride ;
Kim, Namshin ;
Solda, Giulia ;
Croft, Larry J. ;
Taft, Ryan J. ;
Rizzi, Ermanno ;
Askarian-Amiri, Marjan ;
Bonnal, Raoul J. ;
Callari, Maurizio ;
Mignone, Flavio ;
Pesole, Graziano ;
Bertalot, Giovanni ;
Bernardi, Luigi Rossi ;
Albertini, Alberto ;
Lee, Christopher ;
Mattick, John S. ;
Zucchi, Ileana ;
De Bellis, Gianluca .
BMC GENOMICS, 2009, 10
[4]   Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis [J].
Gupta, Rajnish A. ;
Shah, Nilay ;
Wang, Kevin C. ;
Kim, Jeewon ;
Horlings, Hugo M. ;
Wong, David J. ;
Tsai, Miao-Chih ;
Hung, Tiffany ;
Argani, Pedram ;
Rinn, John L. ;
Wang, Yulei ;
Brzoska, Pius ;
Kong, Benjamin ;
Li, Rui ;
West, Robert B. ;
van de Vijver, Marc J. ;
Sukumar, Saraswati ;
Chang, Howard Y. .
NATURE, 2010, 464 (7291) :1071-U148
[5]   Large non-coding RNAs: missing links in cancer? [J].
Huarte, Maite ;
Rinn, John L. .
HUMAN MOLECULAR GENETICS, 2010, 19 :R152-R161
[6]   A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response [J].
Huarte, Maite ;
Guttman, Mitchell ;
Feldser, David ;
Garber, Manuel ;
Koziol, Magdalena J. ;
Kenzelmann-Broz, Daniela ;
Khalil, Ahmad M. ;
Zuk, Or ;
Amit, Ido ;
Rabani, Michal ;
Attardi, Laura D. ;
Regev, Aviv ;
Lander, Eric S. ;
Jacks, Tyler ;
Rinn, John L. .
CELL, 2010, 142 (03) :409-419
[7]   A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains [J].
Hutchinson, John N. ;
Ensminger, Alexander W. ;
Clemson, Christine M. ;
Lynch, Christopher R. ;
Lawrence, Jeanne B. ;
Chess, Andrew .
BMC GENOMICS, 2007, 8 (1)
[8]   MALAT-1, a novel noncoding RNA, and thymosin β4 predict metastasis and survival in early-stage non-small cell lung cancer [J].
Ji, P ;
Diederichs, S ;
Wang, WB ;
Böing, S ;
Metzger, R ;
Schneider, PM ;
Tidow, N ;
Brandt, B ;
Buerger, H ;
Bulk, E ;
Thomas, M ;
Berdel, WE ;
Serve, H ;
Müller-Tidow, C .
ONCOGENE, 2003, 22 (39) :8031-8041
[9]   Noncoding RNA Gas5 Is a Growth Arrest- and Starvation-Associated Repressor of the Glucocorticoid Receptor [J].
Kino, Tomoshige ;
Hurt, Darrell E. ;
Ichijo, Takamasa ;
Nader, Nancy ;
Chrousos, George P. .
SCIENCE SIGNALING, 2010, 3 (107) :ra8
[10]   Long Noncoding RNA HOTAIR Regulates Polycomb-Dependent Chromatin Modification and Is Associated with Poor Prognosis in Colorectal Cancers [J].
Kogo, Ryunosuke ;
Shimamura, Teppei ;
Mimori, Koshi ;
Kawahara, Kohichi ;
Imoto, Seiya ;
Sudo, Tomoya ;
Tanaka, Fumiaki ;
Shibata, Kohei ;
Suzuki, Akira ;
Komune, Shizuo ;
Miyano, Satoru ;
Mori, Masaki .
CANCER RESEARCH, 2011, 71 (20) :6320-6326