Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?

被引:202
作者
Bachmann, Brian O. [1 ]
Van Lanen, Steven G. [2 ]
Baltz, Richard H. [3 ]
机构
[1] Vanderbilt Univ, Dept Chem, Nashville, TN 37225 USA
[2] Univ Kentucky, Coll Pharm, Dept Pharmaceut Sci, Lexington, KY 40536 USA
[3] CognoGen Biotechnol Consulting, Sarasota, FL 34238 USA
关键词
Combinatorial biosynthesis; Genome mining; Gifted microbes; Heterologous expression; Lasso peptides; NRPS; PKS; Secondary metabolite; Streptomyces; NONRIBOSOMAL PEPTIDE BIOSYNTHESIS; STREPTOMYCES-COELICOLOR GENOME; PACTAMYCIN ANALOGS; SEQUENCE; DIVERSITY; ELUCIDATION; POLYKETIDE; PROTEINS; ORIGINS; DRUGS;
D O I
10.1007/s10295-013-1389-9
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Microbial genome mining is a rapidly developing approach to discover new and novel secondary metabolites for drug discovery. Many advances have been made in the past decade to facilitate genome mining, and these are reviewed in this Special Issue of the Journal of Industrial Microbiology and Biotechnology. In this Introductory Review, we discuss the concept of genome mining and why it is important for the revitalization of natural product discovery; what microbes show the most promise for focused genome mining; how microbial genomes can be mined; how genome mining can be leveraged with other technologies; how progress on genome mining can be accelerated; and who should fund future progress in this promising field. We direct interested readers to more focused reviews on the individual topics in this Special Issue for more detailed summaries on the current state-of-the-art.
引用
收藏
页码:175 / 184
页数:10
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