Uniaxial Diffusional Narrowing of NMR Lineshapes for Membrane Proteins Reconstituted in Magnetically Aligned Bicelles and Macrodiscs

被引:3
作者
Tesch, Deanna M. [1 ,2 ]
Pourmoazzen, Zhaleh [1 ]
Awosanya, Emmanuel O. [1 ]
Nevzorov, Alexander A. [1 ]
机构
[1] North Carolina State Univ, Dept Chem, 2620 Yarbrough Dr, Raleigh, NC 27695 USA
[2] Shaw Univ, Dept Chem, 118 E South St, Raleigh, NC 27601 USA
基金
美国国家科学基金会;
关键词
SOLID-STATE NMR; NICOTINIC ACETYLCHOLINE-RECEPTOR; INDUCED CONFORMATIONAL-CHANGES; SPIN-LABELED GRAMICIDIN; ROTATIONAL DIFFUSION; PHOSPHOLIPID-BILAYERS; LIPID-BILAYERS; COAT PROTEIN; CRYSTAL-STRUCTURE; PHOSPHATIDYLCHOLINE BILAYERS;
D O I
10.1007/s00723-018-1056-4
中图分类号
O64 [物理化学(理论化学)、化学物理学]; O56 [分子物理学、原子物理学];
学科分类号
070203 ; 070304 ; 081704 ; 1406 ;
摘要
Structure and dynamics of membrane proteins can be effectively studied by oriented-sample solid-state nuclear magnetic resonance (NMR) techniques when the lipid bilayers are macroscopically aligned with respect to the main magnetic field. Magnetic alignment of the protein-containing membrane bilayer results from the negative susceptibility anisotropy of the lipid hydrocarbon interior yielding perpendicular sample alignment. At this orientation, while the uniformity of alignment represents an essential prerequisite for obtaining high-quality NMR spectra, further line narrowing is obtained by uniaxial motional averaging of the azimuthal parts of the chemical shift anisotropies and dipolar couplings. The motional averaging is brought about by uniaxial rotational diffusion of the protein molecules about the normal to the membrane surface, which is perpendicular to the magnetic field. Uniaxial averaging is efficient when the motion about the axis of alignment becomes sufficiently fast (on the timescale of the dipolar couplings and chemical shift anisotropies). Line narrowing under uniaxial rotation can be theoretically modeled using the stochastic Liouville equation. In this mini-review, we illustrate the method of uniaxial averaging for the relatively small Pf1 coat protein which exhibits excellent resolution in magnetically aligned bicelles due to its fast uniaxial diffusion and even superior resolution in large (30 nm) nanodiscs (macrodiscs) stabilized by a belt peptide. Spectra of Pf1 coat protein in polymer-stabilized macrodiscs, an alternative and more robust alignment media, are presented. We also report on preliminary spectra of a much larger protein-uniformly N-15 labeled M1-M4 domain for the human acetylcholine receptor. While some spectral resolution is apparent, significantly broader linewidths emphasize the need for creating fast rotating discoidal membrane mimetics.
引用
收藏
页码:1335 / 1353
页数:19
相关论文
共 118 条
[71]   Structure of the chemokine receptor CXCR1 in phospholipid bilayers [J].
Park, Sang Ho ;
Das, Bibhuti B. ;
Casagrande, Fabio ;
Tian, Ye ;
Nothnagel, Henry J. ;
Chu, Mignon ;
Kiefer, Hans ;
Maier, Klaus ;
De Angelis, Anna A. ;
Marassi, Francesca M. ;
Opella, Stanley J. .
NATURE, 2012, 491 (7426) :779-+
[72]   Nanodiscs versus Macrodiscs for NMR of Membrane Proteins [J].
Park, Sang Ho ;
Berkamp, Sabrina ;
Cook, Gabriel A. ;
Chan, Michelle K. ;
Viadiu, Hector ;
Opella, Stanley J. .
BIOCHEMISTRY, 2011, 50 (42) :8983-8985
[73]   Mechanically, Magnetically, and "Rotationally Aligned" Membrane Proteins in Phospholipid Bilayers Give Equivalent Angular Constraints for NMR Structure Determination [J].
Park, Sang Ho ;
Das, Bibhuti B. ;
De Angelis, Anna A. ;
Scrima, Mario ;
Opella, Stanley J. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (44) :13995-14003
[74]   Triton X-100 as the "Short-Chain Lipid" Improves the Magnetic Alignment and Stability of Membrane Proteins in Phosphatidylcholine Bilayers for Oriented-Sample Solid-State NMR Spectroscopy [J].
Park, Sang Ho ;
Opella, Stanley J. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (36) :12552-12553
[75]   Structure and Dynamics of the Membrane-Bound Form of Pf1 Coat Protein: Implications of Structural Rearrangement for Virus Assembly [J].
Park, Sang Ho ;
Marassi, Francesca M. ;
Black, David ;
Opella, Stanley J. .
BIOPHYSICAL JOURNAL, 2010, 99 (05) :1465-1474
[76]   Rotational diffusion of membrane proteins in aligned phospholipid bilayers by solid-state NMR spectroscopy [J].
Park, SH ;
Mrse, AA ;
Nevzorov, AA ;
De Angelis, AA ;
Opella, SJ .
JOURNAL OF MAGNETIC RESONANCE, 2006, 178 (01) :162-165
[77]   LATERAL AND ROTATIONAL DIFFUSION OF BACTERIORHODOPSIN IN LIPID BILAYERS - EXPERIMENTAL TEST OF THE SAFFMAN-DELBRUCK EQUATIONS [J].
PETERS, R ;
CHERRY, RJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1982, 79 (14) :4317-4321
[78]   Magnetically aligned phospholipid bilayers with positive ordering: A new model membrane system [J].
Prosser, RS ;
Hwang, JS ;
Vold, RR .
BIOPHYSICAL JOURNAL, 1998, 74 (05) :2405-2418
[79]   Macrodiscs Comprising SMALPs for Oriented Sample Solid-State NMR Spectroscopy of Membrane Proteins [J].
Radoicic, Jasmina ;
Park, Sang Ho ;
Opella, Stanley J. .
BIOPHYSICAL JOURNAL, 2018, 115 (01) :22-25
[80]   RETRACTED: Polymer nanodiscs and macro-nanodiscs of a varying lipid composition (Retracted article. See vol. 54, pg. 14033, 2018) [J].
Ramadugu, Venkata Sudheer Kumar ;
Di Mauro, Giacomo Maria ;
Ravula, Thirupathi ;
Ramamoorthy, Ayyalusamy .
CHEMICAL COMMUNICATIONS, 2017, 53 (78) :10824-10826