The potential of metabolomics for Leishmania research in the post-genomics era

被引:28
作者
Scheltema, Richard A. [1 ]
Decuypere, Saskia [2 ,3 ]
T'Kindt, Ruben [2 ,3 ]
Dujardin, Jean-Claude [2 ]
Coombs, Graham H. [3 ]
Breitling, Rainer [1 ]
机构
[1] Univ Groningen, Groningen Biomol Sci & Biotechnol Inst, Groningen Bioinformat Ctr, NL-9751 NN Haren, Netherlands
[2] Inst Trop Med, Dept Parasitol, Unit Mol Parasitol, B-2000 Antwerp, Belgium
[3] Univ Strathclyde, Strathclyde Inst Pharm & Biomed Sci, Glasgow G4 0NR, Lanark, Scotland
关键词
Post-genomics research; metabolomics; mass spectrometry; liquid chromatography; Leishmania; PROTOZOAN PARASITE LEISHMANIA; DIFFERENTIAL GENE-EXPRESSION; TRANSFORM MASS-SPECTROMETRY; RESISTANT LEISHMANIA; SEQUENCING TECHNOLOGIES; METABOLISM; REVEALS; MODULATION; CHROMATOGRAPHY; AMPLIFICATION;
D O I
10.1017/S0031182009992022
中图分类号
R38 [医学寄生虫学]; Q [生物科学];
学科分类号
07 ; 0710 ; 09 ; 100103 ;
摘要
The post-genomics era has provided researchers with access to a new generation of tools for the global characterization and understanding of pathogen diversity. This review provides a critical summary of published Leishmania post-genomic research efforts to date, and discusses the potential impact of the addition of metabolomics to the post-genomic toolbox. Metabolomics aims at understanding biology by comprehensive metabolite profiling. We present an overview of the design and interpretation of metabolomics experiments in the context of Leishmania research. Sample preparation, measurement techniques, and bioinformatics analysis of the generated complex datasets are discussed in detail. To illustrate the concepts and the expected results of metabolomics analyses, we also present an overview of comparative metabolic profiles of drug-sensitive and drug-resistant Leishmania donovani clinical isolates.
引用
收藏
页码:1291 / 1302
页数:12
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