Automated Tortuosity Analysis of Nerve Fibers in Corneal Confocal Microscopy

被引:29
作者
Zhao, Yitian [1 ]
Zhang, Jiong [2 ]
Pereira, Ella [3 ]
Zheng, Yalin [4 ]
Su, Pan [1 ]
Xie, Jianyang [1 ]
Zhao, Yifan [5 ]
Shi, Yonggang [2 ]
Qi, Hong [6 ]
Liu, Jiang [7 ]
Liu, Yonghuai [3 ]
机构
[1] Chinese Acad Sci, Cixi Inst Biomed Engn, Ningbo Inst Mat Technol, Ningbo 315201, Peoples R China
[2] Univ Southern Calif, Keck Sch Med, Los Angeles, CA 90033 USA
[3] Edge Hill Univ, Dept Comp Sci, Ormskirk L39 4QP, England
[4] Univ Liverpool, Dept Eye & Vis Sci, Liverpool L69 3BX, Merseyside, England
[5] Cranfield Univ, Sch Aerosp Transport & Mfg, Bedford MK43 0AL, England
[6] Peking Univ, Dept Ophthalmol, Hosp 3, Beijing 100191, Peoples R China
[7] Southern Univ Sci & Technol, Dept Comp Sci & Engn, Shenzhen 518055, Peoples R China
基金
美国国家科学基金会; 中国博士后科学基金;
关键词
Biomedical imaging; Blood vessels; Microscopy; Estimation; Lighting; Retina; Corneal nerve; tortuosity; enhancement; segmentation; curvature; IMAGE-ENHANCEMENT; ILLUMINATION; NEUROPATHY; ALGORITHM; FRAMEWORK;
D O I
10.1109/TMI.2020.2974499
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Precise characterization and analysis of corneal nerve fiber tortuosity are of great importance in facilitating examination and diagnosis of many eye-related diseases. In this paper we propose a fully automated method for image-level tortuosity estimation, comprising image enhancement, exponential curvature estimation, and tortuosity level classification. The image enhancement component is based on an extended Retinex model, which not only corrects imbalanced illumination and improves image contrast in an image, but also models noise explicitly to aid removal of imaging noise. Afterwards, we take advantage of exponential curvature estimation in the 3D space of positions and orientations to directly measure curvature based on the enhanced images, rather than relying on the explicit segmentation and skeletonization steps in a conventional pipeline usually with accumulated pre-processing errors. The proposed method has been applied over two corneal nerve microscopy datasets for the estimation of a tortuosity level for each image. The experimental results show that it performs better than several selected state-of-the-art methods. Furthermore, we have performed manual gradings at tortuosity level of four hundred and three corneal nerve microscopic images, and this dataset has been released for public access to facilitate other researchers in the community in carrying out further research on the same and related topics.
引用
收藏
页码:2725 / 2737
页数:13
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