GATA3 is a master regulator of the transcriptional response to low-dose ionizing radiation in human keratinocytes

被引:13
作者
Bonin, Florian [1 ,2 ,3 ]
Molina, Manuella [1 ,2 ,3 ]
Malet, Claude [4 ]
Ginestet, Chantal [4 ]
Berthier-Vergnes, Odile [1 ,2 ,3 ]
Martin, Michele T. [5 ]
Lamartine, Jerome [1 ,2 ,3 ]
机构
[1] Univ Lyon, F-69003 Lyon, France
[2] Univ Lyon 1, F-69003 Lyon, France
[3] CNRS, UMR5534, Ctr Genet Mol & Cellulaire, F-69622 Villeurbanne, France
[4] Ctr Leon Berard, Serv Radiotherapie, F-69008 Lyon, France
[5] IRCM, CEA, Lab Genom & Radiobiol Keratinopoiese, F-91000 Evry, France
关键词
GAMMA-IRRADIATION; SKIN; STRESS; P63; RADIOSENSITIVITY; FIBROBLASTS; MICROARRAY; EXPRESSION; RESOURCE; EXPOSURE;
D O I
10.1186/1471-2164-10-417
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: The general population is constantly exposed to low levels of radiation through natural, occupational or medical irradiation. Even if the biological effects of low-level radiation have been intensely debated and investigated, the molecular mechanisms underlying the cellular response to low doses remain largely unknown. Results: The present study investigated the role of GATA3 protein in the control of the cellular and molecular response of human keratinocytes exposed to a 1 cGy dose of X-rays. Chromatin immunoprecipitation showed GATA3 to be able to bind the promoter of 4 genes responding to a 1 cGy exposure. To go further into the role of GATA3 after ionizing radiation exposure, we studied the cellular and molecular consequences of radiation in GATA3 knock-down cells. Knockdown was obtained by lentiviral-mediated expression of an shRNA targeting the GATA3 transcript in differentiated keratinocytes. First, radiosensitivity was assessed: the toxicity, in terms of immediate survival (with XTT test), associated with 1 cGy radiation was found to be increased in GATA3 knock-down cells. The impact of GATA3 knock-down on the transcriptome of X-ray irradiated cells was also investigated, using oligonucleotide microarrays to assess changes between 3 h and 72 h post-irradiation in normal vs GATA3 knock-down backgrounds; transcriptome response was found to be completely altered in GATA3 knock-down cells, with a strong induction/repression peak 48 h after irradiation. Functional annotation revealed enrichment in genes known to be involved in chaperone activity, TGF beta signalling and stress response. Conclusion: Taken together, these data indicate that GATA3 is an important regulator of the cellular and molecular response of epidermal cells to very low doses of radiation.
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页数:13
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共 33 条
[1]   Egr1 regulates the coordinated expression of numerous EGF receptor target genes as identified by ChIP on chip [J].
Arora, Shilpi ;
Wang, Yipeng ;
Jia, Zhenyu ;
Vardar-Sengul, Saynur ;
Munawar, Ayla ;
Doctor, Kutbuddin S. ;
Birrer, Michael ;
McClelland, Michael ;
Adamson, Eileen ;
Mercola, Dan .
GENOME BIOLOGY, 2008, 9 (11)
[2]   Id2 reverses cell cycle arrest induced by γ-irradiation in human HaCaT keratinocytes [J].
Baghdoyan, S ;
Lamartine, J ;
Castel, D ;
Pitaval, A ;
Roupioz, Y ;
Franco, N ;
Duarte, M ;
Martin, MT ;
Gidrol, X .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (16) :15836-15841
[3]   p63 is upstream of IKKα in epidermal development [J].
Candi, Eleonora ;
Terrinoni, Alessandro ;
Rufini, Alessandro ;
Chikh, Anissa ;
Lena, Anna Maria ;
Suzuki, Yasuhiro ;
Sayan, Berna S. ;
Knight, Richard A. ;
Melino, Gerry .
JOURNAL OF CELL SCIENCE, 2006, 119 (22) :4617-4622
[4]   Biomarkers for human radiation exposure [J].
Chaudhry, M. Ahmad .
JOURNAL OF BIOMEDICAL SCIENCE, 2008, 15 (05) :557-563
[5]   Expression of GATA-3 in epidermis and hair follicle: Relationship to p63 [J].
Chikh, Anissa ;
Sayan, Emre ;
Thibaut, Sebastien ;
Lena, Anna Maria ;
DiGiorgi, Sabrina ;
Bernard, Bruno A. ;
Melino, Gerry ;
Candi, Eleonora .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2007, 361 (01) :1-6
[6]   Human phenotypes associated with GATA-1 mutations [J].
Ciovacco, Wendy A. ;
Raskind, Wendy H. ;
Kacena, Melissa A. .
GENE, 2008, 427 (1-2) :1-6
[7]   Low-dose exposure to γ rays induces specific gene regulations in normal human keratinocytes [J].
Franco, N ;
Lamartine, J ;
Frouin, V ;
Le Minter, P ;
Petal, C ;
Leplat, JJ ;
Libert, F ;
Gidrol, X ;
Martin, MT .
RADIATION RESEARCH, 2005, 163 (06) :623-635
[8]   Assessment of optimal transduction of primary human skin keratinocytes by viral vectors [J].
Gagnoux-Palacios, L ;
Hervouet, C ;
Spirito, F ;
Roques, S ;
Mezzina, M ;
Danos, O ;
Meneguzzi, G .
JOURNAL OF GENE MEDICINE, 2005, 7 (09) :1178-1186
[9]   The Gene Ontology (GO) database and informatics resource [J].
Harris, MA ;
Clark, J ;
Ireland, A ;
Lomax, J ;
Ashburner, M ;
Foulger, R ;
Eilbeck, K ;
Lewis, S ;
Marshall, B ;
Mungall, C ;
Richter, J ;
Rubin, GM ;
Blake, JA ;
Bult, C ;
Dolan, M ;
Drabkin, H ;
Eppig, JT ;
Hill, DP ;
Ni, L ;
Ringwald, M ;
Balakrishnan, R ;
Cherry, JM ;
Christie, KR ;
Costanzo, MC ;
Dwight, SS ;
Engel, S ;
Fisk, DG ;
Hirschman, JE ;
Hong, EL ;
Nash, RS ;
Sethuraman, A ;
Theesfeld, CL ;
Botstein, D ;
Dolinski, K ;
Feierbach, B ;
Berardini, T ;
Mundodi, S ;
Rhee, SY ;
Apweiler, R ;
Barrell, D ;
Camon, E ;
Dimmer, E ;
Lee, V ;
Chisholm, R ;
Gaudet, P ;
Kibbe, W ;
Kishore, R ;
Schwarz, EM ;
Sternberg, P ;
Gwinn, M .
NUCLEIC ACIDS RESEARCH, 2004, 32 :D258-D261
[10]   Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Lempicki, Richard A. .
NATURE PROTOCOLS, 2009, 4 (01) :44-57