Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1T) from a deep-sea hydrothermal vent chimney

被引：4

作者：

Copeland, Alex ^{[2
]}

Gu, Wei ^{[3
]}

Yasawong, Montri ^{[4
]}

Lapidus, Alla ^{[2
]}

Lucas, Susan ^{[2
]}

Deshpande, Shweta ^{[2
]}

Pagani, Ioanna ^{[2
]}

Tapia, Roxanne ^{[2
,3
]}

Cheng, Jan-Fang ^{[2
]}

Goodwin, Lynne A. ^{[2
,3
]}

Pitluck, Sam ^{[2
]}

Liolios, Konstantinos ^{[2
]}

Ivanova, Natalia ^{[2
]}

Mavromatis, Konstantinos ^{[2
]}

Mikhailova, Natalia ^{[2
]}

Pati, Amrita ^{[2
]}

Chen, Amy ^{[5
]}

Palaniappan, Krishna ^{[5
]}

Land, Miriam ^{[2
,7
]}

Pan, Chongle ^{[2
,7
]}

Brambilla, Evelyne-Marie ^{[1
]}

Rohde, Manfred ^{[6
]}

Tindall, Brian J. ^{[1
]}

Sikorski, Johannes ^{[1
]}

Goeker, Markus ^{[1
]}

Detter, John C. ^{[2
,3
]}

Bristow, James ^{[2
]}

Eisen, Jonathan A. ^{[2
,8
]}

Markowitz, Victor ^{[5
]}

Hugenholtz, Philip ^{[2
,9
]}

Kyrpides, Nikos C. ^{[2
]}

Klenk, Hans-Peter ^{[1
]}

Woyke, Tanja ^{[2
]}

机构：

[1] Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany

[2] DOE Joint Genome Inst, Walnut Creek, CA USA

[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA

[4] Srinakharinwirot Univ, Dept Biochem, Bangkok, Thailand

[5] Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[6] HZI Helmholtz Ctr Infect Res, Braunschweig, Germany

[7] Oak Ridge Natl Lab, Oak Ridge, TN USA

[8] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA

[9] Univ Queensland, Sch Chem & Mol Biosci, Australian Ctr Ecogen, Brisbane, Qld, Australia

来源：

STANDARDS IN GENOMIC SCIENCES | 2012年 / 6卷 / 01期

关键词：

strictly aerobic; non-motile; thermophilic; neutrophilic heterotroph; Gram-negative; hydrothermal vent; Thermaceae; GEBA; SP-NOV; GEN; NOV; THERMUS; BACTERIUM; ARCHAEA; DEINOCOCCUS; ALGORITHM; DATABASE; SYSTEM; GRAPHS;

D O I：

10.4056/sigs.2435521

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Marinithermus hydrothermalis Sako et al. 2003 is the type species of the monotypic genus Marinithermus. M. hydrothermalis T1(T) was the first isolate within the phylum "Thermus-Deinococcus" to exhibit optimal growth under a salinity equivalent to that of sea water and to have an absolute requirement for NaCl for growth. M. hydrothermalis T1(T) is of interest because it may provide a new insight into the ecological significance of the aerobic, thermophilic decomposers in the circulation of organic compounds in deep-sea hydrothermal vent ecosystems. This is the first completed genome sequence of a member of the genus Marinithermus and the seventh sequence from the family Thermaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,269,167 bp long genome with its 2,251 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

引用

页码：21 / 30

页数：10

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