NMR and MALDI-TOF MS based characterization of exopolysaccharides in anaerobic microbial aggregates from full-scale reactors

被引:57
作者
Gonzalez-Gil, Graciela [1 ,2 ]
Thomas, Ludivine [3 ]
Emwas, Abdul-Hamid [4 ]
Lens, Piet N. L. [2 ]
Saikaly, Pascal E. [1 ]
机构
[1] King Abdullah Univ Sci & Technol, Biol & Environm Sci & Engn Div, Water Desalinat & Reuse Ctr, Thuwal 239556900, Saudi Arabia
[2] UNESCO IHE, NL-2611 AX Delft, Netherlands
[3] King Abdullah Univ Sci & Technol, Biosci Core Lab, Thuwal 239556900, Saudi Arabia
[4] King Abdullah Univ Sci & Technol, Adv Nanofabricat Imaging & Characterizat, Thuwal 239556900, Saudi Arabia
关键词
EXTRACELLULAR POLYMERIC SUBSTANCES; GRANULAR SLUDGE; KEY EXOPOLYSACCHARIDE; MASS-SPECTROMETRY; ACTIVATED-SLUDGE; ALGINATE; MATRIX; EPS; VALIDATION; EXTRACTION;
D O I
10.1038/srep14316
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Anaerobic granular sludge is composed of multispecies microbial aggregates embedded in a matrix of extracellular polymeric substances (EPS). Here we characterized the chemical fingerprint of the polysaccharide fraction of EPS in anaerobic granules obtained from full-scale reactors treating different types of wastewater. Nuclear magnetic resonance (NMR) signals of the polysaccharide region from the granules were very complex, likely as a result of the diverse microbial population in the granules. Using nonmetric multidimensional scaling (NMDS), the H-1 NMR signals of reference polysaccharides (gellan, xanthan, alginate) and those of the anaerobic granules revealed that there were similarities between the polysaccharides extracted from granules and the reference polysaccharide alginate. Further analysis of the exopolysaccharides from anaerobic granules, and reference polysaccharides using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) revealed that exopolysaccharides from two of the anaerobic granular sludges studied exhibited spectra similar to that of alginate. The presence of sequences related to the synthesis of alginate was confirmed in the metagenomes of the granules. Collectively these results suggest that alginate-like exopolysaccharides are constituents of the EPS matrix in anaerobic granular sludge treating different industrial wastewater. This finding expands the engineered environments where alginate has been found as EPS constituent of microbial aggregates.
引用
收藏
页数:12
相关论文
共 46 条
[1]   Development and validation of an NMR-based identity assay for bacterial polysaccharides [J].
Abeygunawardana, C ;
Williams, TC ;
Sumner, JS ;
Hennessey, JP .
ANALYTICAL BIOCHEMISTRY, 2000, 279 (02) :226-240
[2]   Microbial community structure across fluid gradients in the Juan de Fuca Ridge hydrothermal system [J].
Anderson, Rika E. ;
Beltran, Monica Torres ;
Hallam, Steven J. ;
Baross, John A. .
FEMS MICROBIOLOGY ECOLOGY, 2013, 83 (02) :324-339
[3]   Nonmucoid Pseudomonas aeruginosa expresses alginate in the lungs of patients with cystic fibrosis and in a mouse model [J].
Bragonzi, A ;
Worlitzsch, D ;
Pier, GB ;
Timpert, P ;
Ulrich, M ;
Hentzer, M ;
Andersen, JB ;
Givskov, M ;
Conese, M ;
Döring, G .
JOURNAL OF INFECTIOUS DISEASES, 2005, 192 (03) :410-419
[4]  
Clarke KR, 2001, Change in Marine Communities:An Approach to Statistical Analysis and Interpretation, V2nd
[5]   Extraction of extracellular polymeric substances (EPS) from anaerobic granular sludges: comparison of chemical and physical extraction protocols [J].
D'Abzac, Paul ;
Bordas, Francois ;
Van Hullebusch, Eric ;
Lens, Piet N. L. ;
Guibaud, Gilles .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2010, 85 (05) :1589-1599
[6]   Characterization of the Mineral Fraction Associated to Extracellular Polymeric Substances (EPS) in Anaerobic Granular Sludges [J].
d'Abzac, Paul ;
Bordas, Francois ;
Joussein, Emmanuel ;
van Hullebusch, Eric ;
Lens, Piet N. L. ;
Guibaud, Gilles .
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2010, 44 (01) :412-418
[7]   1H-NMR study of Na alginates extracted from Sargassum spp. in relation to metal biosorption [J].
Davis, TA ;
Llanes, F ;
Volesky, B ;
Diaz-Pulido, G ;
McCook, L ;
Mucci, A .
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2003, 110 (02) :75-90
[8]   Extracellular DNA is abundant and important for microcolony strength in mixed microbial biofilms [J].
Dominiak, Dominik Marek ;
Nielsen, Jeppe Lund ;
Nielsen, Per Halkjaer .
ENVIRONMENTAL MICROBIOLOGY, 2011, 13 (03) :710-721
[9]   Microbial exopolysaccharides: Main examples of synthesis, excretion, genetics and extraction [J].
Donot, F. ;
Fontana, A. ;
Baccou, J. C. ;
Schorr-Galindo, S. .
CARBOHYDRATE POLYMERS, 2012, 87 (02) :951-962
[10]   Isolation of a microbial consortium from activated sludge for the biological treatment of food waste [J].
Fong, KPY ;
Tan, HM .
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 2000, 16 (05) :441-443