Complete Coding Sequence of Andean Potato Mottle Virus from a 40-Year-Old Sample from Peru

被引：1

作者：

Adams, Ian P. ^{[1
,2
]}

Fribourg, Cesar ^{[3
]}

Fox, Adrian ^{[1
]}

Boonham, Neil ^{[2
]}

Jones, Roger A. C. ^{[4
,5
]}

机构：

[1] Fera Sci Ltd, York, N Yorkshire, England

[2] Newcastle Univ, Inst Agri Food Res & Innovat, Newcastle Upon Tyne, Tyne & Wear, England

[3] Univ Nacl Agr, Dept Fitopatol, Lima, Peru

[4] Univ Western Australia, Fac Sci, Inst Agr, Crawley, WA, Australia

[5] Dept Primary Ind & Reg Dev, S Perth, WA, Australia

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2019年 / 8卷 / 40期

关键词：

D O I：

10.1128/MRA.00871-19

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

A complete coding sequence of the type strain of Andean potato mottle virus from Peru (isolate Lm) was obtained. Comparison of its RNA1 and RNA2 sequences with variants of this virus isolated in Brazil revealed RNA1 and RNA2 nucleotide identities of 81 to 83% and 70 to 71%, respectively.

引用

页数：2

共 17 条

[1]

Adams IP, 2018, MICROBIOL RESOUR ANN, V7, DOI [10.1128/MRA.01064-18, 10.1128/mra.01064-18]

[2]

Adams IP, 2018, MICROBIOL RESOUR ANN, V7, DOI [10.1128/MRA.01066-18, 10.1128/mra.01066-18]

[3]

Adams IP, 2017, GENOME ANNOUNCEMENTS, V5, DOI [10.1128/genomeA.00141-17, 10.1128/genomea.00141-17]

[4]

[Anonymous], 2011, SICKLE WINDOWED ADAP

[5]

AVILA AC, 1984, PLANT DIS, V68, P997, DOI 10.1094/PD-69-997

[6]

Brioso P. S. T., 1993, Fitopatologia Brasileira, V18, P526

[7] BLAST plus : architecture and applications [J].

Camacho, Christiam ;

Coulouris, George ;

Avagyan, Vahram ;

Ma, Ning ;

Papadopoulos, Jason ;

Bealer, Kevin ;

Madden, Thomas L. .

BMC BIOINFORMATICS, 2009, 10

[8]

FRIBOURG CE, 1977, PHYTOPATHOLOGY, V67, P969, DOI 10.1094/Phyto-67-969

[9]

Fribourg CE, 1979, ANDEAN POTATO MOTTLE

[10] Full-length transcriptome assembly from RNA-Seq data without a reference genome [J].

Grabherr, Manfred G. ;

Haas, Brian J. ;

Yassour, Moran ;

Levin, Joshua Z. ;

Thompson, Dawn A. ;

Amit, Ido ;

Adiconis, Xian ;

Fan, Lin ;

Raychowdhury, Raktima ;

Zeng, Qiandong ;

Chen, Zehua ;

Mauceli, Evan ;

Hacohen, Nir ;

Gnirke, Andreas ;

Rhind, Nicholas ;

di Palma, Federica ;

Birren, Bruce W. ;

Nusbaum, Chad ;

Lindblad-Toh, Kerstin ;

Friedman, Nir ;

Regev, Aviv .

NATURE BIOTECHNOLOGY, 2011, 29 (07) :644-U130

← 1 2 →