Studying protein dynamics on microsecond-to-millisecond (mu s-ms) time scales can provide important insight into protein function. In magic-angle-spinning (MAS) NMR, mu s dynamics can be visualized by R1 rho rotating-frame relaxation dispersion experiments in different regimes of radio-frequency field strengths: at low RF field strength, isotropic-chemical-shift fluctuation leads to "Bloch-McConnell-type" relaxation dispersion, while when the RF field approaches rotary resonance conditions bond angle fluctuations manifest as increased R1 rho rate constants ("Near-Rotary-Resonance Relaxation Dispersion", NERRD). Here we explore the joint analysis of both regimes to gain comprehensive insight into motion in terms of geometric amplitudes, chemical-shift changes, populations and exchange kinetics. We use a numerical simulation procedure to illustrate these effects and the potential of extracting exchange parameters, and apply the methodology to the study of a previously described conformational exchange process in microcrystalline ubiquitin.
机构:
Max Planck Inst Biophys Chem, Dept Theoret & Computat Biophys, Fassberg 11, D-37077 Gottingen, Germany
Max Planck Inst Biophys Chem, Dept Struct Biol, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
Smith, Colin A.
de Groot, Bert L.
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Theoret & Computat Biophys, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
de Groot, Bert L.
Griesinger, Christian
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Struct Biol, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
Griesinger, Christian
Lee, Donghan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USAUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
机构:
Max Planck Inst Biophys Chem, Dept Theoret & Computat Biophys, Fassberg 11, D-37077 Gottingen, Germany
Max Planck Inst Biophys Chem, Dept Struct Biol, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
Smith, Colin A.
de Groot, Bert L.
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Theoret & Computat Biophys, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
de Groot, Bert L.
Griesinger, Christian
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Biophys Chem, Dept Struct Biol, Fassberg 11, D-37077 Gottingen, GermanyUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA
Griesinger, Christian
Lee, Donghan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USAUniv Louisville, Dept Med, James Graham Brown Canc Ctr, 505 S Hancock St, Louisville, KY 40202 USA