Unbiased classification of spatial strategies in the Barnes maze

被引:48
作者
Illouz, Tomer [1 ]
Madar, Ravit [1 ,2 ]
Clague, Charlotte [1 ]
Griffioen, Kathleen J. [3 ]
Louzoun, Yoram [1 ,4 ]
Okun, Eitan [1 ,2 ]
机构
[1] Bar Ilan Univ, Leslie & Susan Gonda Multidisciplinary Brain Res, IL-5290002 Ramat Gan, Israel
[2] Liberty Univ, Mina & Everard Goodman Fac Life Sci, Lynchburg, VA 24515 USA
[3] Liberty Univ, Dept Biol & Chem, Lynchburg, VA 24515 USA
[4] Bar Ilan Univ, Dept Math, IL-5290002 Ramat Gan, Israel
关键词
WATER-MAZE; MEMORY; MICE;
D O I
10.1093/bioinformatics/btw376
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Motivation: Spatial learning is one of the most widely studied cognitive domains in neuroscience. The Morris water maze and the Barnes maze are the most commonly used techniques to assess spatial learning and memory in rodents. Despite the fact that these tasks are well-validated paradigms for testing spatial learning abilities, manual categorization of performance into behavioral strategies is subject to individual interpretation, and thus to bias. We have previously described an unbiased machine- learning algorithm to classify spatial strategies in the Morris water maze. Results: Here, we offer a support vector machine-based, automated, Barnes-maze unbiased strategy (BUNS) classification algorithm, as well as a cognitive score scale that can be used for memory acquisition, reversal training and probe trials. The BUNS algorithm can greatly benefit Barnes maze users as it provides a standardized method of strategy classification and cognitive scoring scale, which cannot be derived from typical Barnes maze data analysis.
引用
收藏
页码:3314 / 3320
页数:7
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