Roles of highly expressed PAICS in lung adenocarcinoma

被引:39
作者
Zhou, Shuyi [1 ]
Yan, Yuanliang [1 ]
Chen, Xi [1 ]
Wang, Xiang [1 ]
Zeng, Shuangshuang [1 ]
Qian, Long [1 ]
Wei, Jie [1 ]
Yang, Xue [1 ]
Zhou, Yangying [2 ]
Gong, Zhicheng [1 ,3 ]
Xu, Zhijie [4 ]
机构
[1] Cent S Univ, Xiangya Hosp, Dept Pharm, Changsha 410008, Hunan, Peoples R China
[2] Cent S Univ, Xiangya Hosp, Dept Oncol, Changsha 410008, Hunan, Peoples R China
[3] Cent S Univ, Xiangya Hosp, Natl Clin Res Ctr Geriatr Disorders, Changsha 410008, Hunan, Peoples R China
[4] Cent S Univ, Xiangya Hosp, Dept Pathol, Changsha 410008, Hunan, Peoples R China
基金
中国国家自然科学基金; 中国博士后科学基金;
关键词
PAICS; Lung adenocarcinoma; Methylation; Therapeutic target; GENE-EXPRESSION; DNA METHYLATION; WEB SERVER; CANCER; IDENTIFICATION; PATHWAYS; SURVIVAL; DATABASE;
D O I
10.1016/j.gene.2018.12.064
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Phosphoribosylaminoimidazole carboxylase (PAICS), a de novo purine metabolic enzyme, has been identified as an oncogene in several tumor types, including breast cancer and prostate cancer. However, the role of PAICS in human lung adenocarcinoma (LADC) requires further study. Methods: In this research, the effects of PAICS on the occurrence and prognosis of LADC were evaluated using integrative bioinformatics analyses. Results: By employing the bioinformatics analyses of several public databases, PAICS, which is overexpressed in the LADC tissues, was identified as a potential tumor-promoting gene in LADC biology. Several relevant clinical studies indicated that the upregulation of PAICS was statistically correlated with a shorter overall survival time. Moreover, the carcinogenic function of PAICS in LADC was validated by the further protein-protein interactions (PPI) and biological process annotation analysis. Mechanistically, we found that the PAILS methylation level was significantly lower in the LADC tissues compared to the normal lung tissues. Furthermore, using the MEXPRESS web tool, we predicted 15 possible DNA methylation sites in the nucleotide sequences of PAICS, which could explain the alteration in the PAICS expression levels in LADC. Conclusions: Our work demonstrates that high levels of PAICS are found in LADC and that this gene may be a potential therapeutic target for this subset of lung cancers. Determining the detailed roles of PAICS in LADC biology may provide useful information for further investigations.
引用
收藏
页码:1 / 8
页数:8
相关论文
共 34 条
  • [1] Nucleosidic DNA demethylating epigenetic drugs - A comprehensive review from discovery to clinic
    Agrawal, Khushboo
    Das, Viswanath
    Vyas, Pankhuri
    Hajduch, Marian
    [J]. PHARMACOLOGY & THERAPEUTICS, 2018, 188 : 45 - 79
  • [2] Bauer-Mehren Anna, 2013, Methods Mol Biol, V1021, P37, DOI 10.1007/978-1-62703-450-0_3
  • [3] Metabolic pathways promoting cancer cell survival and growth
    Boroughs, Lindsey K.
    DeBerardinis, Ralph J.
    [J]. NATURE CELL BIOLOGY, 2015, 17 (04) : 351 - 359
  • [4] The utilization of next-generation sequencing to detect somatic mutations and predict clinical prognosis of Chinese non-small cell lung cancer patients
    Cao, Liming
    Long, Long
    Li, Min
    Yang, Huaping
    Deng, Pengbo
    Mao, Xinru
    Xiang, Jianxing
    Li, Bing
    Zhang, Tengfei
    Hu, Chengping
    [J]. ONCOTARGETS AND THERAPY, 2018, 11 : 2637 - 2646
  • [5] A Role for De Novo Purine Metabolic Enzyme PAICS in Bladder Cancer Progression
    Chakravarthi, Balabhadrapatruni V. S. K.
    Pena, Maria Del Carmen Rodriguez
    Agarwal, Sumit
    Chandrashekar, Darshan S.
    Balasubramanya, Sai Akshaya Hodigere
    Jabboure, Fayez J.
    Matoso, Andres
    Bivalacqua, Trinity J.
    Rezaei, Katayoon
    Chaux, Alcides
    Grizzle, William E.
    Sonpavde, Guru
    Gordetsky, Jennifer
    Netto, George J.
    Varambally, Sooryanarayana
    [J]. NEOPLASIA, 2018, 20 (09): : 894 - 904
  • [6] Expression and Role of PAICS, a De Novo Purine Biosynthetic Gene in Prostate Cancer
    Chakravarthi, Balabhadrapatruni V. S. K.
    Goswami, Moloy T.
    Pathi, Satya S.
    Dodson, Matthew
    Chandrashekar, Darshan S.
    Agarwal, Sumit
    Nepal, Saroj
    Balasubramanya, Sai Akshaya Hodigere
    Siddiqui, Javed
    Lonigro, Robert J.
    Chinnaiyan, Arul M.
    Kunju, Lakshmi P.
    Palanisamy, Nallasivam
    Varambally, Sooryanarayana
    [J]. PROSTATE, 2017, 77 (01) : 10 - 21
  • [7] UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses
    Chandrashekar, Darshan S.
    Bashel, Bhuwan
    Balasubramanya, Sai Akshaya Hodigere
    Creighton, Chad J.
    Ponce-Rodriguez, Israel
    Chakravarthi, Balabhadrapatruni V. S. K.
    Varambally, Sooryanarayana
    [J]. NEOPLASIA, 2017, 19 (08): : 649 - 658
  • [8] DNA methylation in thoracic neoplasms
    Chen, Chen
    Yin, Ni
    Yin, Bangliang
    Lu, Qianjin
    [J]. CANCER LETTERS, 2011, 301 (01) : 7 - 16
  • [9] Cancer Statistics in China, 2015
    Chen, Wanqing
    Zheng, Rongshou
    Baade, Peter D.
    Zhang, Siwei
    Zeng, Hongmei
    Bray, Freddie
    Jemal, Ahmedin
    Yu, Xue Qin
    He, Jie
    [J]. CA-A CANCER JOURNAL FOR CLINICIANS, 2016, 66 (02) : 115 - 132
  • [10] Comprehensive molecular profiling of lung adenocarcinoma
    Collisson, Eric A.
    Campbell, Joshua D.
    Brooks, Angela N.
    Berger, Alice H.
    Lee, William
    Chmielecki, Juliann
    Beer, David G.
    Cope, Leslie
    Creighton, Chad J.
    Danilova, Ludmila
    Ding, Li
    Getz, Gad
    Hammerman, Peter S.
    Hayes, D. Neil
    Hernandez, Bryan
    Herman, James G.
    Heymach, John V.
    Jurisica, Igor
    Kucherlapati, Raju
    Kwiatkowski, David
    Ladanyi, Marc
    Robertson, Gordon
    Schultz, Nikolaus
    Shen, Ronglai
    Sinha, Rileen
    Sougnez, Carrie
    Tsao, Ming-Sound
    Travis, William D.
    Weinstein, John N.
    Wigle, Dennis A.
    Wilkerson, Matthew D.
    Chu, Andy
    Cherniack, Andrew D.
    Hadjipanayis, Angela
    Rosenberg, Mara
    Weisenberger, Daniel J.
    Laird, Peter W.
    Radenbaugh, Amie
    Ma, Singer
    Stuart, Joshua M.
    Byers, Lauren Averett
    Baylin, Stephen B.
    Govindan, Ramaswamy
    Meyerson, Matthew
    Rosenberg, Mara
    Gabriel, Stacey B.
    Cibulskis, Kristian
    Sougnez, Carrie
    Kim, Jaegil
    Stewart, Chip
    [J]. NATURE, 2014, 511 (7511) : 543 - 550