The nuclear cap-binding complex as choreographer of gene transcription and pre-mRNA processing

被引:44
|
作者
Rambout, Xavier [1 ,2 ]
Maquat, Lynne E. [1 ,2 ]
机构
[1] Univ Rochester, Sch Med & Dent, Dept Biochem & Biophys, Rochester, NY 14642 USA
[2] Univ Rochester, Ctr RNA Biol, Rochester, NY 14642 USA
基金
美国国家卫生研究院;
关键词
CBP80; CBP20; CBC; transcription preinitiation complex; transcription initiation; promoter-proximal pausing; transcription elongation; RNA 3 ' end formation; transcription termination; pre-mRNA splicing; alternative splicing; PROTEIN COMPLEX; POLYMERASE-II; RIBONUCLEOPROTEIN PARTICLE; FACTOR RECRUITMENT; ELONGATION-FACTOR; U7; SNRNP; U1; YEAST; ARABIDOPSIS; INITIATION;
D O I
10.1101/gad.339986.120
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The largely nuclear cap-binding complex (CBC) binds to the 5 ' caps of RNA polymerase II (RNAPII)-synthesized transcripts and serves as a dynamic interaction platform for a myriad of RNA processing factors that regulate gene expression. While influence of the CBC can extend into the cytoplasm, here we review the roles of the CBC in the nucleus, with a focus on protein-coding genes. We discuss differences between CBC function in yeast and mammals, covering the steps of transcription initiation, release of RNAPII from pausing, transcription elongation, cotranscriptional pre-mRNA splicing, transcription termination, and consequences of spurious transcription. We describe parameters known to control the binding of generic or gene-specific cofactors that regulate CBC activities depending on the process(es) targeted, illustrating how the CBC is an ever-changing choreographer of gene expression.
引用
收藏
页码:1113 / 1127
页数:15
相关论文
共 50 条
  • [41] The human cap-binding complex is functionally connected to the nuclear RNA exosome
    Andersen, Peter Refsing
    Domanski, Michal
    Kristiansen, Maiken S.
    Storvall, Helena
    Ntini, Evgenia
    Verheggen, Celine
    Schein, Aleks
    Bunkenborg, Jakob
    Poser, Ina
    Hallais, Marie
    Sandberg, Rickard
    Hyman, Anthony
    LaCava, John
    Rout, Michael P.
    Andersen, Jens S.
    Bertrand, Edouard
    Jensen, Torben Heick
    NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2013, 20 (12) : 1367 - 1376
  • [42] Genetic and physical interactions involving the yeast nuclear cap-binding complex
    Fortes, P
    Kufel, J
    Fornerod, M
    Polycarpou-Schwarz, M
    Lafontaine, D
    Tollervey, D
    Mattaj, IW
    MOLECULAR AND CELLULAR BIOLOGY, 1999, 19 (10) : 6543 - 6553
  • [43] The Nuclear Cap-Binding Complex Mediates Meiotic Silencing by Unpaired DNA
    Decker, Logan M.
    Xiao, Hua
    Boone, Erin C.
    Vierling, Michael M.
    Shanker, Benjamin S.
    Kingston, Shanika L.
    Boone, Shannon F.
    Haynes, Jackson B.
    Shiu, Patrick K. T.
    G3-GENES GENOMES GENETICS, 2017, 7 (04): : 1149 - 1155
  • [44] Normal and altered pre-mRNA processing in the DMD gene
    Sylvie Tuffery-Giraud
    Julie Miro
    Michel Koenig
    Mireille Claustres
    Human Genetics, 2017, 136 : 1155 - 1172
  • [45] Normal and altered pre-mRNA processing in the DMD gene
    Tuffery-Giraud, Sylvie
    Miro, Julie
    Koenig, Michel
    Claustres, Mireille
    HUMAN GENETICS, 2017, 136 (09) : 1155 - 1172
  • [46] Cap and cap-binding proteins in the control of gene expression
    Topisirovic, Ivan
    Svitkin, Yuri V.
    Sonenberg, Nahum
    Shatkin, Aaron J.
    WILEY INTERDISCIPLINARY REVIEWS-RNA, 2011, 2 (02) : 277 - 298
  • [47] The Nuclear Cap-Binding Complex, a multitasking binding partner of RNA polymerase II transcripts
    Kataoka, Naoyuki
    JOURNAL OF BIOCHEMISTRY, 2023, 175 (01): : 9 - 15
  • [48] Nuclear galectins: Functionally redundant components in processing of pre-mRNA
    Patterson, RJ
    Dagher, SF
    Vyakarnam, A
    Wang, JL
    TRENDS IN GLYCOSCIENCE AND GLYCOTECHNOLOGY, 1997, 9 (45) : 77 - 85
  • [49] Pre-mRNA 3′-end processing complex assembly and function
    Chan, Serena
    Choi, Eun-A
    Shi, Yongsheng
    WILEY INTERDISCIPLINARY REVIEWS-RNA, 2011, 2 (03) : 321 - 335
  • [50] Molecular Architecture of the Human Pre-mRNA 3′ Processing Complex
    Shi, Yongsheng
    Di Giammartino, Dafne Campigli
    Taylor, Derek
    Sarkeshik, Ali
    Rice, William J.
    Yates, John R., III
    Frank, Joachim
    Manley, James L.
    MOLECULAR CELL, 2009, 33 (03) : 365 - 376