A Systematic Approach to Multifactorial Cardiovascular Disease Causal Analysis

被引:23
作者
Schwartz, Stephen M. [1 ]
Schwartz, Hillel T. [4 ]
Horvath, Steven [5 ]
Schadt, Eric [6 ]
Lee, Su-In [2 ,3 ]
机构
[1] Univ Washington, Dept Pathol, Seattle, WA 98195 USA
[2] Univ Washington, Dept Comp Sci, Seattle, WA 98195 USA
[3] Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
[4] CALTECH, Div Biol, Pasadena, CA 91125 USA
[5] Univ Calif Los Angeles, Dept Biostat, Los Angeles, CA USA
[6] Mt Sinai Sch Med, Inst Genome & Multiscale Biol, New York, NY USA
关键词
analysis; atherosclerosis; Bayes; Bayesian; causality; genetics; graphical; heart failure; hypertension; multifactorial; systems biology; GENE-EXPRESSION; GENOMIC ANALYSIS; COMMON VARIANTS; BREAST-CANCER; DRUG RESPONSE; CELL-DEATH; SUSCEPTIBILITY; HYPERTENSION; NETWORKS; MICE;
D O I
10.1161/ATVBAHA.112.300123
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
The combination of systems biology and large data sets offers new approaches to the study of cardiovascular diseases. These new approaches are especially important for the common cardiovascular diseases that have long been described as multifactorial. This promise is undermined by biologists' skepticism of the spider web-like network diagrams required to analyze these large data sets. Although these spider webs resemble composites of the familiar biochemical pathway diagrams, the complexity of the webs is overwhelming. As a result, biologists collaborate with data analysts whose mathematical methods seem much like those of experts using Ouija boards. To make matters worse, it is not evident how to design experiments when the network implies that many molecules must be pan of the disease process. Our goal is to remove some of this mystery and suggest a simple experimental approach to the design of experiments appropriate for such analysis. We will attempt to explain how combinations of data sets that include all possible variables, graphical diagrams, complementation of different data sets, and Bayesian analyses now make it possible to determine the causes of multifactorial cardiovascular disease. We will describe this approach using the term causal analysis. Finally, we will describe how causal analysis is already being used to decipher the interactions among cytokines as causes of cardiovascular disease. (Arterioscler Thromb Vasc Biol. 2012;32:2821-2835.)
引用
收藏
页码:2821 / 2835
页数:15
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