Intermolecular Proton Transfer in Microhydrated Guanine-Cytosine Base Pairs: a New Mechanism for Spontaneous Mutation in DNA

被引:79
作者
Ceron-Carrasco, J. P. [1 ]
Requena, A. [1 ]
Zuniga, J. [1 ]
Michaux, C. [2 ]
Perpete, E. A. [3 ]
Jacquemin, D. [3 ]
机构
[1] Univ Murcia, Fac Quim, Dept Quim Fis, E-30100 Murcia, Spain
[2] Fac Univ Notre Dame Paix, Lab Chim Biol Struct, B-5000 Namur, Belgium
[3] Fac Univ Notre Dame Paix, Lab Chim Theor Appl, B-5000 Namur, Belgium
关键词
HYDROGEN-TRANSFER MECHANISM; ADENINE-THYMINE; AB-INITIO; MOLECULAR-DYNAMICS; NUCLEIC-ACID; REPLICATION FIDELITY; INTERACTION ENERGIES; GAS-PHASE; TAUTOMERISM; WATER;
D O I
10.1021/jp906551f
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Accurate calculations of the double proton transfer (DPT) in the adenine-thymine base pair (AT) were presented in a previous work [J. Phys. Chem. A 2009, 113, 7892.] where we demonstrated that the mechanism of the reaction in solution is strongly affected by surrounding water. Here we extend our methodology to the guanine-cytosine base pair (GC), for which it turns out that the proton transfer in the gas phase is a synchronous concerted mechanism. The O(G)-H-N(C) hydrogen bond strength emerges as the key parameter in this process, to the extent that complete transfer takes place by means of this hydrogen bond. Since the main effect of the molecular environment is precisely to weaken this bond, the direct proton transfer is not possible in solution, and thus the tautomeric equilibrium must be assisted by surrounding water molecules in an asynchronous concerted mechanism. This result demonstrates that water plays a crucial role in proton reactions. It does not act as a passive element but actually catalyzes the DPT.
引用
收藏
页码:10549 / 10556
页数:8
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