Step Forward in Molecular Diagnostics of Lyssaviruses - Results of a Ring Trial among European Laboratories

被引:7
作者
Fischer, Melina [1 ]
Wernike, Kerstin [1 ]
Freuling, Conrad M. [2 ]
Mueller, Thomas [2 ]
Aylan, Orhan [3 ]
Brochier, Bernard [4 ]
Cliquet, Florence [5 ]
Vazquez-Moron, Sonia [6 ]
Hostnik, Peter [7 ]
Huovilainen, Anita [8 ]
Isaksson, Mats [9 ]
Kooi, Engbert A. [10 ]
Mooney, Jean [11 ]
Turcitu, Mihai [12 ]
Rasmussen, Thomas B. [13 ]
Revilla-Fernandez, Sandra [14 ]
Smreczak, Marcin [15 ]
Fooks, Anthony R. [16 ]
Marston, Denise A. [16 ]
Beer, Martin [1 ]
Hoffmann, Bernd [1 ]
机构
[1] Friedrich Loeffler Inst, Inst Diagnost Virol, Greifswald, Germany
[2] Friedrich Loeffler Inst, Inst Mol Biol, Greifswald, Germany
[3] Etlik Cent Vet Control & Res Inst, Ankara, Turkey
[4] Sci Inst Publ Hlth, Brussels, Belgium
[5] Anses Nancy Technopole Agr & Vet, Malzeville, France
[6] Ctr Nacl Microbiol, Inst Salud Carlos Ill, Majadahonda, Spain
[7] Natl Vet Inst, Ljubljana, Slovenia
[8] Finnish Food Safety Author, Helsinki, Finland
[9] Swedish Natl Vet Inst, Uppsala, Sweden
[10] Cent Vet Inst, Lelystad, Netherlands
[11] Cent Vet Res Lab, Div Virol, Celbridge, Ireland
[12] Inst Diag & Anim Hlth, Bucharest, Romania
[13] Tech Univ Denmark, Natl Vet Inst, Lindholm, Denmark
[14] Inst Vet Dis Control, Modling, Austria
[15] Natl Inst Vet Res, Pulawy, Poland
[16] Anim Hlth & Vet Labs Agcy, Addlestone, Surrey, England
来源
PLOS ONE | 2013年 / 8卷 / 03期
关键词
POLYMERASE-CHAIN-REACTION; RABIES VIRUS-RNA; REAL-TIME PCR; RT-PCR; SALIVA SAMPLES; VIRAL-RNA; BAT; ASSAY; INFECTION; GENOTYPES;
D O I
10.1371/journal.pone.0058372
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Rabies is a lethal and notifiable zoonotic disease for which diagnostics have to meet the highest standards. In recent years, an evolution was especially seen in molecular diagnostics with a wide variety of different detection methods published. Therefore, a first international ring trial specifically designed on the use of reverse transcription polymerase chain reaction (RT-PCR) for detection of lyssavirus genomic RNA was organized. The trial focussed on assessment and comparison of the performance of conventional and real-time assays. In total, 16 European laboratories participated. All participants were asked to investigate a panel of defined lyssavirus RNAs, consisting of Rabies virus (RABV) and European bat lyssavirus 1 and 2 (EBLV-1 and -2) RNA samples, with systems available in their laboratory. The ring trial allowed the important conclusion that conventional RT-PCR assays were really robust assays tested with a high concordance between different laboratories and assays. The real-time RT-PCR system by Wakeley et al. (2005) in combination with an intercalating dye, and the combined version by Hoffmann and co-workers (2010) showed good sensitivity for the detection of all RABV samples included in this test panel. Furthermore, all used EBLV-specific assays, real-time RT-PCRs as well as conventional RT-PCR systems, were shown to be suitable for a reliable detection of EBLVs. It has to be mentioned that differences were seen in the performance between both the individual RT-PCR systems and the laboratories. Laboratories which used more than one molecular assay for testing the sample panel always concluded a correct sample result. Due to the markedly high genetic diversity of lyssaviruses, the application of different assays in diagnostics is needed to achieve a maximum of diagnostic accuracy. To improve the knowledge about the diagnostic performance proficiency testing at an international level is recommended before using lyssavirus molecular diagnostics e.g. for confirmatory testing.
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页数:9
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