Glucose-6-phosphate dehydrogenase (G6PD) gene mutations detection by improved high-resolution DNA melting assay

被引:28
作者
Pan, Meichen [1 ]
Lin, Min [2 ]
Yang, Lin [3 ]
Wu, Jiaoren [2 ]
Zhan, Xiaofen [2 ]
Zhao, Ying [3 ]
Wen, Yingfang [4 ]
Liu, Guirong [4 ]
Yang, Liye [2 ]
Cai, Yingmu [1 ]
机构
[1] Shantou Univ Med Coll, Affiliated Hosp 1, Med Lab, Shantou 515041, Guangdong, Peoples R China
[2] Southern Med Univ, Chaozhou Cent Hosp, Lab Med Ctr, Chaozhou 521021, Guangdong, Peoples R China
[3] Shantou Univ Med Coll, Shantou 515041, Guangdong, Peoples R China
[4] Meixian Peoples Hosp, Med Lab, Meizhou 514000, Guangdong, Peoples R China
基金
美国国家科学基金会;
关键词
Glucose-6-phosphate dehydrogenase (G6PD); Gene mutation; High-resolution melting (HRM) assay; DNA sequencing; DEFICIENCY; POLYMORPHISM; POPULATION; VARIANTS; TAIWAN;
D O I
10.1007/s11033-012-2381-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glucose-6-phosphate dehydrogenase (G6PD) deficiency is a common inherited disorder worldwide including southern China. G6PD gene mutations cause deficiency of the enzyme and a large spectrum of diseases. High-resolution DNA melting (HRM) assay was recently introduced as a rapid, inexpensive and effective method for genotyping. But there was a shortcoming of this method that hemizygous and homozygous genotypes were not easily distinguished from wild-types. Here we used improved HRM method for a small-scale screening of G6PD-deficient variants among people of Meizhou region. Then all amplicons were ascertained by direct DNA sequencing. These results indicated that HRM method was a major technical advance for G6PD mutations screening.
引用
收藏
页码:3073 / 3082
页数:10
相关论文
共 50 条
[31]   Concordance between glucose-6-phosphate dehydrogenase (G6PD) genotype and phenotype and rasburicase use in patients with hematologic malignancies [J].
Robinson, Katherine M. ;
Yang, Wenjian ;
Haidar, Cyrine E. ;
Hankins, Jane S. ;
Jay, Dennis W. ;
Kornegay, Nancy ;
Rubnitz, Jeffrey E. ;
Broeckel, Ulrich ;
Cheng, Cheng ;
Pui, Ching-Hon ;
Jeha, Sima ;
Relling, Mary V. .
PHARMACOGENOMICS JOURNAL, 2019, 19 (03) :305-314
[32]   Discovery of Small-Molecule Activators for Glucose-6-Phosphate Dehydrogenase (G6PD) Using Machine Learning Approaches [J].
Saddala, Madhu Sudhana ;
Lennikov, Anton ;
Huang, Hu .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (04)
[33]   First Evaluation of Glucose-6-Phosphate Dehydrogenase (G6PD) Deficiency in Vivax Malaria Endemic Regions in the Republic of Korea [J].
Goo, Youn-Kyoung ;
Ji, So-Young ;
Shin, Hyun-Il ;
Moon, Jun-Hye ;
Cho, Shin-Hyung ;
Lee, Won-Ja ;
Kim, Jung-Yeon .
PLOS ONE, 2014, 9 (05)
[34]   Glucose-6-Phosphate Dehydrogenase (G6PD) Deficiency and Late-stage Age-Related Macular Degeneration [J].
Pinna, Antonio ;
Solinas, Giuliana ;
Giancipoli, Ermete ;
Porcu, Tiziana ;
Zinellu, Angelo ;
Damico-Ricci, Giuseppe ;
Boscia, Francesco ;
Lanzetta, Paolo ;
Avitabile, Teresio ;
Schwartz, Arthur G. ;
Carru, Ciriaco .
INTERNATIONAL JOURNAL OF MEDICAL SCIENCES, 2019, 16 (05) :623-629
[35]   Prevalence and molecular heterogeneity of glucose-6-phosphate dehydrogenase (G6PD) deficiency in the Senoi Malaysian Orang Asli population [J].
Koh, Danny Xuan-Rong ;
Zailani, Mohamed Afiq Hidayat ;
Sabudin, Raja Zahratul Azma Raja ;
Muniandy, Sanggari ;
Hata, Nur Awatif Akmal Muhamad ;
Noor, Siti Noor Baya Mohd ;
Zakaria, Norhazilah ;
Othman, Ainoon ;
Ismail, Endom .
PLOS ONE, 2023, 18 (12)
[36]   Detection of 1311 polymorphism in the glucose-6-phosphate dehydrogenase gene by microarray technique [J].
Yildiz, Sule Menziletoglu ;
Ariyurek, Sedefgul Yuzbasioglu ;
Tahiroglu, Murat ;
Aksoy, Kiymet .
ARCHIVES OF MEDICAL SCIENCE, 2011, 7 (04) :586-591
[37]   Rapid quantitative assays for glucose-6-phosphate dehydrogenase (G6PD) and hemoglobin combined on a capillary-driven microfluidic chip [J].
Rocca, Marco ;
Temiz, Yuksel ;
Salva, Marie L. ;
Castonguay, Samuel ;
Gervais, Thomas ;
Niemeyer, Christof M. ;
Delamarche, Emmanuel .
LAB ON A CHIP, 2021, 21 (18) :3573-3582
[38]   Genotypic glucose-6-phosphate dehydrogenase (G6PD) deficiency protects against Plasmodium falciparum infection in individuals living in Ghana [J].
Amoah, Linda Eva ;
Asare, Kwame Kumi ;
Dickson, Donu ;
Abankwa, Joana ;
Busayo, Abena ;
Bredu, Dorcas ;
Annan, Sherifa ;
Asumah, George Adu ;
Peprah, Nana Yaw ;
Asamoah, Alexander ;
Laurencia Malm, Keziah .
PLOS ONE, 2021, 16 (09)
[39]   Restriction fragment length polymorphism (RFLP) of the X chromosome linked glucose-6-phosphate dehydrogenase (G6PD) locus in India [J].
Chalvam, Rati ;
Colah, Roshan B. ;
Mohanty, Dipika ;
Ghosh, Kanjaksha ;
Mukherjee, Malay B. .
ANNALS OF HUMAN BIOLOGY, 2011, 38 (01) :106-109
[40]   Life and Death of Glucose-6-Phosphate Dehydrogenase (G6PD) Deficient Erythrocytes - Role of Redox Stress and Band 3 Modifications [J].
Arese, Paolo ;
Gallo, Valentina ;
Pantaleo, Antonella ;
Turrini, Franco .
TRANSFUSION MEDICINE AND HEMOTHERAPY, 2012, 39 (05) :328-334