Molecular determinants for the stereospecific reduction of 3-ketosteroids and reactivity towards all-trans-retinal of a short-chain dehydrogenase/reductase (DHRS4)

被引:20
作者
Endo, Satoshi [1 ]
Maeda, Satoshi [1 ]
Matsunaga, Toshiyuki [1 ]
Dhagat, Urmi [2 ]
El-Kabbani, Ossama [2 ]
Tanaka, Nobutada [3 ]
Nakamura, Kazuo T. [3 ]
Tajima, Kazuo [4 ]
Hara, Akira [1 ]
机构
[1] Gifu Pharmaceut Univ, Biochem Lab, Gifu 5028585, Japan
[2] Monash Univ, Monash Inst Pharmaceut Sci, Parkville, Vic 3052, Australia
[3] Showa Univ, Sch Pharmaceut Sci, Tokyo 1428555, Japan
[4] Hokuriku Univ, Fac Pharmaceut Sci, Kanagawa 9201181, Japan
关键词
Short-chain dehydrogenase/reductase; DHRS4; Carbonyl reductase; 3-Ketosteroid reductase; Stereospecificity; All-trans-retinal; TETRAMERIC CARBONYL REDUCTASE; HUMAN SORBITOL DEHYDROGENASE; HYDROXYSTEROID DEHYDROGENASES; DIRECTED MUTAGENESIS; HORMONE METABOLISM; ACTIVE-SITE; SDR; SUBSTRATE; STEROIDS; ENZYME;
D O I
10.1016/j.abb.2008.11.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DHRS4, a member of the short-chain dehydrogenase/reductase superfamily, reduces all-trans-retinal and xenobiotic carbonyl compounds. Human DHRS4 differs from other animal enzymes in kinetic constants for the substrates, particularly in its low reactivity to retinoids. We have found that pig, rabbit and clog DHRS4s reduce benzil and 3-ketosteroids into S-benzoin and 3 alpha-hydroxysteroids, respectively, in contrast to the stereoselectivity of human DHRS4 which produces R-benzoin and 3 beta-hydroxysteroids. Among substrate-binding residues predicted from the crystal structure of pig DHRS4, F158 and L161 in the animal DHRS4 are serine and phenylalanine, respectively, in the human enzyme. Double mutation (F158S/L161F) of pig DHRS4 led to an effective switch of its substrate affinity and stereochemistry into those similar to human DHRS4. The roles of the two residues in determining the stereospecificity in 3-ketosteroid reduction were confirmed by reverse mutation (S158F/F161L) in the human enzyme. The stereochemical control was evaluated by comparison of the 3D models of pig wild-type and mutant DHRS4s with the modeled substrates. Additional mutation of T177N into the human S158F/F161L mutant resulted in almost complete kinetic conversion into a pig DHRS4-type form, suggesting a role of N177 in forming the substrate-binding cavity through an intersubunit interaction in pig and other animal DHRS4s, and explaining why the human enzyme shows low reactivity towards retinoids. (C) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码:183 / 190
页数:8
相关论文
共 34 条
[1]   Directed mutagenesis alters the stereochemistry of catalysis by isolated ketoreductase domains from the erythromycin polyketide synthase [J].
Baerga-Ortiz, A ;
Popovic, B ;
Siskos, AP ;
O'Hare, HM ;
Spiteller, D ;
Williams, MG ;
Campillo, N ;
Spencer, JB ;
Leadlay, PF .
CHEMISTRY & BIOLOGY, 2006, 13 (03) :277-285
[2]  
BRADFORD MM, 1976, ANAL BIOCHEM, V72, P248, DOI 10.1016/0003-2697(76)90527-3
[3]   Modelling studies of the active site of human sorbitol dehydrogenase: An approach to structure-based inhibitor design of the enzyme [J].
Darmanin, C ;
El-Kabbani, O .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2001, 11 (24) :3133-3136
[4]   Modelling studies on the binding of substrate and inhibitor to the active site of human sorbitol dehydrogenase [J].
Darmanin, C ;
El-Kabbani, O .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2000, 10 (10) :1101-1104
[5]   Structure of 3(17)α-hydroxysteroid dehydrogenase (AKR1C21) holoenzyme from an orthorhombic crystal form:: an insight into the bifunctionality of the enzyme [J].
Dhagat, Urmi ;
Carbone, Vincenzo ;
Chung, Roland P. -T. ;
Schulze-Briese, Clemens ;
Endo, Satoshi ;
Hara, Akira ;
El-Kabbani, Ossama .
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2007, 63 :825-830
[6]   Determining structure and function of steroid dehydrogenase enzymes by sequence analysis, homology modeling, and rational mutational analysis [J].
Duax, WL ;
Thomas, J ;
Pletnev, V ;
Addlagatta, A ;
Huether, R ;
Habegger, L ;
Weeks, CM .
TESTICULAR CELL DYNAMICS AND ENDOCRINE SIGNALING, 2005, 1061 :135-148
[7]   Crystal structure of human L-Xylulose reductase holoenzyme: Probing the role of Asn107 with site-directed mutagenesis [J].
El-Kabbani, O ;
Ishikura, S ;
Darmanin, C ;
Carbone, V ;
Chung, RPT ;
Usami, N ;
Hara, A .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2004, 55 (03) :724-732
[8]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[9]   Characterization of an oligomeric carbonyl reductase of dog liver: Its identity with peroxisomal tetrameric carbonyl reductase [J].
Endo, Satoshi ;
Matsunaga, Toshiyuki ;
Nagano, Makoto ;
Abe, Hiroko ;
Ishikura, Syuhei ;
Imamura, Yorishige ;
Hara, Akira .
BIOLOGICAL & PHARMACEUTICAL BULLETIN, 2007, 30 (09) :1787-1791
[10]   Mouse 17α-hydroxysteroid dehydrogenase (AKR1C21) binds steroids differently from other aldo-keto reductases:: Identification and characterization of amino acid residues critical for substrate binding [J].
Faucher, Frederick ;
Cantin, Line ;
Pereira de Jesus-Tran, Karine ;
Lemieux, Melanie ;
Luu-The, Van ;
Labrie, Fernand ;
Breton, Rock .
JOURNAL OF MOLECULAR BIOLOGY, 2007, 369 (02) :525-540