Efficient calculation of many-body induced electrostatics in molecular systems

被引:33
|
作者
McLaughlin, Keith [1 ]
Cioce, Christian R. [1 ]
Pham, Tony [1 ]
Belof, Jonathan L. [2 ]
Space, Brian [1 ]
机构
[1] Univ S Florida, Dept Chem, Tampa, FL 33620 USA
[2] Lawrence Livermore Natl Lab, Livermore, CA 94550 USA
基金
美国国家科学基金会;
关键词
METAL-ORGANIC FRAMEWORK; EWALD SUMMATION; MODEL; MECHANICS; POLARIZABILITIES; POLARIZATION; CHEMISTRY; PROTEINS; DYNAMICS; SORPTION;
D O I
10.1063/1.4829144
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Potential energy functions including many-body polarization are in widespread use in simulations of aqueous and biological systems, metal-organics, molecular clusters, and other systems where electronically induced redistribution of charge among local atomic sites is of importance. The polarization interactions, treated here via the methods of Thole and Applequist, while long-ranged, can be computed for moderate-sized periodic systems with extremely high accuracy by extending Ewald summation to the induced fields as demonstrated by Nymand, Sala, and others. These full Ewald polarization calculations, however, are expensive and often limited to very small systems, particularly in Monte Carlo simulations, which may require energy evaluation over several hundred-thousand configurations. For such situations, it shall be shown that sufficiently accurate computation of the polarization energy can be produced in a fraction of the central processing unit (CPU) time by neglecting the long-range extension to the induced fields while applying the long-range treatments of Ewald or Wolf to the static fields; these methods, denoted Ewald E-Static and Wolf E-Static (WES), respectively, provide an effective means to obtain polarization energies for intermediate and large systems including those with several thousand polarizable sites in a fraction of the CPU time. Furthermore, we shall demonstrate a means to optimize the damping for WES calculations via extrapolation from smaller trial systems. (C) 2013 AIP Publishing LLC.
引用
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页数:11
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