Noncoding RNAs in the Regulation of Pluripotency and Reprogramming

被引:31
|
作者
Sherstyuk, Vladimir V. [1 ,2 ,3 ,4 ]
Medvedev, Sergey P. [1 ,2 ,3 ,4 ]
Zakian, Suren M. [1 ,2 ,3 ,4 ]
机构
[1] Russian Acad Sci, Siberian Branch, Fed Res Ctr, Inst Cytol & Genet, 10 Lavrentyeva Ave, Novosibirsk 630090, Russia
[2] Minist Healthcare Russian Federat, E Meshalkin Natl Med Res Ctr, 15 Rechkunovskaya St, Novosibirsk 630055, Russia
[3] Russian Acad Sci, Inst Chem Biol & Fundamental Med, Siberian Branch, 8 Lavrentyeva Ave, Novosibirsk 630090, Russia
[4] Novosibirsk State Univ, 2 Pirogova St, Novosibirsk 630090, Russia
基金
俄罗斯科学基金会;
关键词
Pluripotent stem cells; Pluripotency; Reprogramming; Noncoding RNA; MicroRNA; Long noncoding RNA; Genome editing; CRISPR/Cas9; EMBRYONIC STEM-CELLS; SMALL NUCLEOLAR RNA; GROUND-STATE; TRANSCRIPTIONAL REPRESSORS; MESENCHYMAL TRANSITION; WIDE IDENTIFICATION; PROFILING REVEALS; MIRNA EXPRESSION; DNA METHYLATION; MIR-200; FAMILY;
D O I
10.1007/s12015-017-9782-9
中图分类号
Q813 [细胞工程];
学科分类号
摘要
Pluripotent stem cells have great potential for developmental biology and regenerative medicine. Embryonic stem cells, which are obtained from blastocysts, and induced pluripotent stem cells, which are generated by the reprogramming of somatic cells, are two main types of pluripotent cells. It is important to understand the regulatory network that controls the pluripotency state and reprogramming process. Various types of noncoding RNAs (ncRNAs) have emerged as substantial components of regulatory networks. The most studied class of ncRNAs in the context of pluripotency and reprogramming is microRNAs (miRNAs). In addition to canonical microRNAs, other types of small RNAs with miRNA-like function are expressed in PSCs. Another class of ncRNAs, long ncRNAs, are also involved in pluripotency and reprogramming regulation. Thousands of ncRNAs have been annotated to date, and a significant number of the molecules do not have known function. In this review, we briefly summarized recent advances in this field and described existing genome-editing approaches to study ncRNA functions.
引用
收藏
页码:58 / 70
页数:13
相关论文
共 50 条
  • [21] Reprogramming cell fate to pluripotency: the decision-making signalling pathways
    Sanges, Daniela
    Cosma, Maria-Pia
    INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY, 2010, 54 (11-12) : 1575 - 1587
  • [22] Combined Noncoding RNA-mRNA Regulomics Signature in Reprogramming and Pluripotency in iPSCs
    Salloum-Asfar, Salam
    Abdulla, Sara A. A.
    Taha, Rowaida Z. Z.
    Thompson, I. Richard
    Emara, Mohamed M. M.
    CELLS, 2022, 11 (23)
  • [23] Epigenetic Reprogramming Induced Pluripotency
    Meiliana, Anna
    Wijaya, Andi
    INDONESIAN BIOMEDICAL JOURNAL, 2011, 3 (02): : 93 - 109
  • [24] Noncoding RNAs in regulation of plant secondary metabolism
    Deng, Keyin
    Li, Ziwei
    Huang, Tengbo
    Huang, Jianzi
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2024, 211
  • [25] Arrayed functional genetic screenings in pluripotency reprogramming and differentiation
    Panepucci, Rodrigo Alexandre
    de Souza Lima, Ildercilio Mota
    STEM CELL RESEARCH & THERAPY, 2019, 10 (1)
  • [26] Transcriptional and epigenetic mechanisms of cellular reprogramming to induced pluripotency
    van den Hurk, Mark
    Kenis, Gunter
    Bardy, Cedric
    van den Hove, Daniel L.
    Gage, Fred H.
    Steinbusch, Harry W.
    Rutten, Bart P.
    EPIGENOMICS, 2016, 8 (08) : 1131 - 1149
  • [27] Regulation of the mammalian epigenome by long noncoding RNAs
    Whitehead, Joanne
    Pandey, Gaurav Kumar
    Kanduri, Chandrasekhar
    BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2009, 1790 (09): : 936 - 947
  • [28] Role of noncoding RNAs in cardiac ageing
    Varghese, Lijo N.
    Schwenke, Daryl O.
    Katare, Rajesh
    FRONTIERS IN CARDIOVASCULAR MEDICINE, 2023, 10
  • [29] Noncoding RNAs and the control of hormonal signaling via nuclear receptor regulation
    Ottaviani, Silvia
    de Giorgio, Alexander
    Harding, Victoria
    Stebbing, Justin
    Castellano, Leandro
    JOURNAL OF MOLECULAR ENDOCRINOLOGY, 2014, 53 (02) : R61 - R70
  • [30] Using heterokaryons to understand pluripotency and reprogramming
    Piccolo, Francesco M.
    Pereira, Carlos F.
    Cantone, Irene
    Brown, Karen
    Tsubouchi, Tomomi
    Soza-Ried, Jorge
    Merkenschlager, Matthias
    Fisher, Amanda G.
    PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2011, 366 (1575) : 2260 - 2265