Spectroscopic, Structural, DFT and Molecular Docking Studies on Novel Cocrystal Salt Hydrate of Chromotropic Acid and Its Antibiofilm Activity

被引:23
作者
Abidi, Syed Sibte Asghar [1 ,2 ]
Garg, Utsav [1 ]
Azim, Yasser [1 ]
Alam, Mahboob [3 ]
Gupta, Abhishek Kumar [4 ,5 ]
Pradeep, Chullikkattil P. [4 ]
Azum, Naved [6 ,7 ]
Asiri, Abdullah M. [6 ,7 ]
机构
[1] Aligarh Muslim Univ, ZH Coll Engn & Technol, Dept Appl Chem, Aligarh 202002, Uttar Pradesh, India
[2] Aligarh Muslim Univ, Community Coll, Fac Engn & Technol, Polymer & Coating Technol, Aligarh 202002, Uttar Pradesh, India
[3] Dongguk Univ, Div Chem & Biotechnol, 123 Dongdae Ro, Gyeongju, South Korea
[4] Indian Inst Technol Mandi, Sch Basic Sci, Kamand 175005, Himachal Prades, India
[5] Univ St Andrews, Sch Phys & Astron, St Andrews, Fife, Scotland
[6] King Abdulaziz Univ, Fac Sci, Chem Dept, Jeddah 21589, Saudi Arabia
[7] King Abdulaziz Univ, Ctr Excellence Adv Mat Res, Jeddah 21589, Saudi Arabia
关键词
Chromotropic acid; Cocrystal salt hydrate; Antibiofilm; Density functional theory; Hirshfeld surface analysis; CRYSTAL; INHIBITION; BIOFILMS; LIGAND; ENERGY;
D O I
10.1007/s13369-020-04822-x
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A novel organic cocrystal salt hydrate (CTPTH) of Chromotropic acid with 1,10-phenanthroline was successfully obtained using both traditional solution method and liquid-assisted grinding method, a green approach. The formation and characterization were done by Powder x-ray diffraction, Fourier-transform infrared spectroscopy, thermogravimetric analysis, and the structural confirmation by single crystal x-ray diffraction. The molecular properties were studied using density functional theory, B3LYP/def2-SVP including dispersion correction (D3) to calculate the HOMO and LUMO energies using Orca and Gaussian packages. The calculated geometric parameters were in good agreement with those of experimentally observed. The non-bonding interaction between the CTPTH and active site of the crystal structure of quorum-quenchingN-Acyl homoserine lactone lactonase (PDB: 2BR6) in bacterium was studied by molecular docking. The total energy of ligand interaction of CTPTH with the receptor is found to be - 42.78 kcal mol(-1). The Hirshfeld surfaces were mapped overd(norm)for the identification and quantification of robust synthons for a better understanding of the overall packing pattern of CTPTH. In addition, the antibiofilm efficacy of CTPTH against the pathogenic bacteriumPseudomonas aeruginosawas also determined.
引用
收藏
页码:353 / 364
页数:12
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