Complete genome sequence of acetate-producing Klebsiella pneumoniae L5-2 isolated from infant feces

被引:5
|
作者
Park, Yong-Soo [1 ,4 ]
Kang, Jisu [1 ,3 ]
Chung, Won-Hyong [1 ]
Lim, Mi Young [1 ]
Seo, Myung-Ji [2 ]
Nam, Young-Do [1 ,3 ]
Yoon, Jung-Hoon [4 ]
Seo, Dong-Ho [1 ]
机构
[1] Korea Food Res Inst, Res Grp Healthcare, 245 Nongsaengmyeong Ro, Wanju Gun 55365, Jeollabuk Do, South Korea
[2] Incheon Natl Univ, Div Bioengn, Incheon 22012, South Korea
[3] Korea Univ Sci & Technol, Dept Food Biotechnol, Daejeon 34113, South Korea
[4] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon 16419, South Korea
关键词
Klebsiella pneumoniae; Infant; Gut microbiota; Whole-genome sequencing; Short chain fatty acid; Acetate; ESCHERICHIA-COLI; GUT MICROBIOTA; DATABASE; GENE; 1,3-PROPANEDIOL; PATHOGENS; GLYCEROL; ETHANOL; VFDB; KEGG;
D O I
10.1007/s13205-019-1578-y
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Acetate is an important metabolite in infants as it can affect metabolism as well as immune and inflammatory responses. However, there have been no studies on acetate production by Klebsiella pneumoniae isolated from infant feces. In this study, we isolated a K. pneumoniae strain, L5-2, from infant feces, and we found it produces acetate. The genome of L5-2 consisted of a 5,237,123-bp single chromosome and a 139,211-bp single plasmid. The G + C content was 57.27%. By whole-genome analysis of K. pneumoniae L5-2, we identified seven genes related to acetate production (poxA, pta, eutD, ackA, eutP, eutQ, and adhE). We confirmed acetate production by K. pneumoniae L5-2 by ion chromatography. The aldehyde/alcohol dehydrogenase (adhE) activity of K. pneumoniae L5-2 was significantly higher than that of the K. pneumoniae subsp. ozaenae ATCC 11296. Thus, the acetate-producing ability of K. pneumoniae L5-2 was influenced by the adhE gene. In addition, K. pneumoniae L5-2 had significantly less virulence factor-encoding genes than other K. pneumoniae strains isolated from humans. In conclusion, K. pneumoniae L5-2 isolated from infant feces has less virulence factors and higher adhE activity than other K. pneumoniae strains.
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页数:9
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