Pro5 is not essential for the formation of `Ni-hook' in nickel superoxide dismutase

被引:3
作者
Basak, Priyanka [1 ]
Zambelli, Barbara [2 ]
Cabelli, Diane E. [3 ]
Ciurli, Stefano [2 ]
Maroney, Michael J. [1 ,4 ]
机构
[1] Univ Massachusetts, Dept Chem, Amherst, MA 01003 USA
[2] Univ Bologna, Dept Pharm & Biotechnol, Lab Bioinorgan Chem, Bologna, Italy
[3] Brookhaven Natl Lab, Dept Chem, Bldg 555A,POB 5000, Upton, NY 11973 USA
[4] Univ Massachusetts, Program Mol & Cellular Biol, Amherst, MA 01003 USA
基金
美国国家卫生研究院;
关键词
NiSOD; Ni-hook; cis /trans isomerization; Isothermal titration calorimetry; X-ray absorption spectroscopy; CIS-TRANS ISOMERIZATION; PEPTIDE-BONDS; PROLINE RESIDUES; COMPLEXES; MECHANISM; CATALYSIS; NITROGEN; LIGAND;
D O I
10.1016/j.jinorgbio.2022.111858
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The N-terminus of nickel-dependent superoxide dismutase (NiSOD) forms a structural motif known as the "Ni-hook," where the peptide wraps around the metal to bring cysteine-2 and cysteine-6 into spatial proximity, allowing these residues to coordinate in a cis-geometry. A highly conserved proline-5 residue in the Ni-hook adopts a cis-conformation that is widely considered important for its formation. Herein, we investigate this role by point mutation of Pro5 to alanine. The results obtained show that the variant exhibits wild-type-like redox catalysis and features a Ni(III) center very similar to that found in enzyme. Structural analysis using Xray absorption spectroscopy of the nickel sites in as-isolated P5A-NiSOD reveals changes in the variant and are consistent with a six-coordinate Ni site with (N/O)(4)S-2 coordination. These changes are attributed to changes in the Ni(II) site structure. Nickel-binding studies using isothermal titration calorimetry reveal two binding events with K-d = 25(20) nM, and 250(60) nM. These events are attributed to i) Ni(II) binding to a preformed Ni-hook containing cis-Pro5 and ii) the combination of trans- to cis- isomerization upon Ni(II) binding, respectively. The higher-affinity binding event is absent in P5A-NiSOD, an observation attributed to the low abundance of the cisAla5 isomer in the apo-protein.
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页数:9
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