Risk of eighteen genome-wide association study-identified genetic variants for colorectal cancer and colorectal adenoma in Han Chinese

被引:9
|
作者
Tan, Chunwen [1 ,2 ]
Hu, Wangxiong [1 ]
Huang, Yanqin [1 ]
Zhou, Jiaojiao [1 ]
Zheng, Shu [1 ]
机构
[1] Zhejiang Univ, Key Lab Canc Prevent & Intervent, Key Lab Mol Biol Med Sci,Canc Inst, Affililiated Hosp 2,China Natl Minist Educ,Sch Me, Hangzhou, Zhejiang, Peoples R China
[2] Zhejiang Prov Hosp Tradit Chinese Med, Hangzhou, Zhejiang, Peoples R China
关键词
risk; genetic variants; colorectal cancer; colorectal adenoma; Chinese; NUCLEOTIDE POLYMORPHISM ASSOCIATIONS; SUSCEPTIBILITY LOCI; CHROMOSOME; 8Q24; ENVIRONMENT INTERACTION; 9P24; HETEROGENEITY; HAPLOTYPE; AFRICAN; HSSB1; SCAN;
D O I
10.18632/oncotarget.12750
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Recent genome-wide association studies (GWAS) identified eighteen single-nucleotide polymorphisms (SNPs) to be significantly associated with the risk of colorectal cancer (CRC). However, overall results of the following replications are inconsistent and little is known about whether these associations also exit in colorectal adenomas (CRA). Methods: The SNP genotyping was performed using a Sequenom MassARRAY to investigate the association of these eighteen SNPs with colorectal neoplasm in a case-control study consisted of 1049 colorectal cancers, 283 adenomas, and 1030 controls. Results: Two of these SNPs, rs10505477 and rs719725, showed evidence of an association in both CRC and CRA in our study population. Besides, seven SNPs (rs10808555, rs7014346, rs7837328, rs704017, rs11196172, rs4779584, and rs7229639) were significantly associated with CRC, and another one SNP rs11903757 was over-represented in CRA compared with controls. The strongest association was provided by rs11196172 (OR = 2.02, 95% CI = 1.66 -2.46, P < 0.0001) and rs11903757 (OR = 1.96, 95% CI = 1.28 -3.00, P = 0.0026). Conclusion: These results suggest that some previously reported SNP associations also have impact on CRC and CRA predispositions in the Han Chinese population. A part of genetic risk to CRC is possibly mediated by susceptibility to adenomas.
引用
收藏
页码:77651 / 77663
页数:13
相关论文
共 50 条
  • [41] Genome-wide association study and meta-analysis in Northern European populations replicate multiple colorectal cancer risk loci
    Tanskanen, Tomas
    van den Berg, Linda
    Valimaki, Niko
    Aavikko, Mervi
    Ness-Jensen, Eivind
    Hveem, Kristian
    Wettergren, Yvonne
    Lindskog, Elinor Bexe
    Tonisson, Neeme
    Metspalu, Andres
    Silander, Kaisa
    Orlando, Giulia
    Law, Philip J.
    Tuupanen, Sari
    Gylfe, Alexandra E.
    Hanninen, Ulrika A.
    Cajuso, Tatiana
    Kondelin, Johanna
    Sarin, Antti-Pekka
    Pukkala, Eero
    Jousilahti, Pekka
    Salomaa, Veikko
    Ripatti, Samuli
    Palotie, Aarno
    Jarvinen, Heikki
    Renkonen-Sinisalo, Laura
    Lepisto, Anna
    Bohm, Jan
    Mecklin, Jukka-Pekka
    Al-Tassan, Nada A.
    Palles, Claire
    Martin, Lynn
    Barclay, Ella
    Tenesa, Albert
    Farrington, Susan M.
    Timofeeva, Maria N.
    Meyer, Brian F.
    Wakil, Salma M.
    Campbell, Harry
    Smith, Christopher G.
    Idziaszczyk, Shelley
    Maughan, Tim S.
    Kaplan, Richard
    Kerr, Rachel
    Kerr, David
    Buchanan, Daniel D.
    Win, Aung K.
    Hopper, John
    Jenkins, Mark A.
    Newcomb, Polly A.
    INTERNATIONAL JOURNAL OF CANCER, 2018, 142 (03) : 540 - 546
  • [42] Genome-wide association study identifies two risk loci for tuberculosis in Han Chinese
    Zheng, Ruijuan
    Li, Zhiqiang
    He, Fusheng
    Liu, Haipeng
    Chen, Jianhua
    Chen, Jiayu
    Xie, Xuefeng
    Zhou, Juan
    Chen, Hao
    Wu, Xiangyang
    Wu, Juehui
    Chen, Boyu
    Liu, Yahui
    Cui, Haiyan
    Fan, Lin
    Sha, Wei
    Liu, Yin
    Wang, Jiqiang
    Huang, Xiaochen
    Zhang, Linfeng
    Xu, Feifan
    Wang, Jie
    Feng, Yonghong
    Qin, Lianhua
    Yang, Hua
    Liu, Zhonghua
    Cui, Zhenglin
    Liu, Feng
    Chen, Xinchun
    Gao, Shaorong
    Sun, Silong
    Shi, Yongyong
    Ge, Baoxue
    NATURE COMMUNICATIONS, 2018, 9
  • [43] Genetic Risk Loci and Familial Associations in Migraine: A Genome-Wide Association Study in the Han Chinese Population of Taiwan
    Liu, Yi
    Yeh, Po-Kuan
    Lin, Yu -Kai
    Liang, Chih-Sung
    Tsai, Chia -Lin
    Lin, Guan-Yu
    An, Yu -Chin
    Tsai, Ming -Chen
    Hung, Kuo-Sheng
    Yang, Fu -Chi
    JOURNAL OF CLINICAL NEUROLOGY, 2024, 20 (04): : 439 - 449
  • [44] Validation of genome-wide association study-identified single nucleotide polymorphisms in a case-control study of pancreatic cancer from Taiwan
    Shan, Yan-Shen
    Chen, Li-Tzong
    Wu, Jin-Shang
    Chang, Yin-Fan
    Lee, Chih-Ting
    Wu, Chih-Hsing
    Chiang, Nai-Jung
    Huang, Hsin-En
    Yen, Chia-Jui
    Chao, Ying-Jui
    Tsai, Hui-Jen
    Chen, Chiung-Yu
    Kang, Jui-Wen
    Kuo, Chin-Fu
    Tsai, Chia-Rung
    Weng, Ya-Ling
    Yang, Han-Chien
    Liu, Hui-Chin
    Chang, Jeffrey S.
    JOURNAL OF BIOMEDICAL SCIENCE, 2020, 27 (01)
  • [45] Genetic Variants, Cardiovascular Risk and Genome-Wide Association Studies
    Companioni, Osmel
    Rodriguez Esparragon, Francisco
    Medina Fernandez-Aceituno, Alfonso
    Rodriguez Perez, Jose Carlos
    REVISTA ESPANOLA DE CARDIOLOGIA, 2011, 64 (06): : 509 - 514
  • [46] Genome-wide expression profiling-based copy number variations and colorectal cancer risk in Chinese
    Wang, Ke
    Yu, Xingchen
    Jiang, Hongwei
    Huang, Jiao
    Wang, Huanzhuo
    Jiang, Hongyu
    Wei, Sheng
    Liu, Li
    MOLECULAR CARCINOGENESIS, 2019, 58 (07) : 1324 - 1333
  • [47] Association of genetic variants of human telomerase with colorectal polyps and colorectal cancer risk
    Hofer, Philipp
    Baierl, Andreas
    Bernhart, Kathrin
    Leeb, Gernot
    Mach, Karl
    Micksche, Michael
    Gsur, Andrea
    MOLECULAR CARCINOGENESIS, 2012, 51 : E176 - E182
  • [48] Genetic Etiology of Common Cancer in Chinese Populations Based on Genome-Wide Association Study
    Chang Jiang
    Wei Li-Xuan
    Wu Chen
    Yu Dian-Ke
    Tan Wen
    Lin Dong-Xin
    PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2014, 41 (10) : 1041 - 1046
  • [49] A genome-wide scan of 10 000 gene-centric variants and colorectal cancer risk
    Webb, Emily
    Broderick, Peter
    Lubbe, Steven
    Chandler, Ian
    Tomlinson, Ian
    Houlston, Richard S.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2009, 17 (11) : 1507 - 1514
  • [50] A genome-wide scan of 10 000 gene-centric variants and colorectal cancer risk
    Emily Webb
    Peter Broderick
    Steven Lubbe
    Ian Chandler
    Ian Tomlinson
    Richard S Houlston
    European Journal of Human Genetics, 2009, 17 : 1507 - 1514