Distinct fungal communities associated with different organs of the mangroveSonneratia albain the Malay Peninsula

被引:16
作者
Lee, Nicole Li Ying [1 ]
Huang, Danwei [1 ,2 ]
Quek, Zheng Bin Randolph [1 ]
Lee, Jen Nie [3 ]
Wainwright, Benjamin J. [4 ]
机构
[1] Natl Univ Singapore, Dept Biol Sci, 16 Sci Dr 4, Singapore 117558, Singapore
[2] Natl Univ Singapore, Trop Marine Sci Inst, 18 Kent Ridge Rd, Singapore 119227, Singapore
[3] Univ Malaysia Terengganu, Fac Sci & Marine Environm, Kuala Nerus 21030, Malaysia
[4] Natl Univ Singapore, Yale NUS Coll, 16 Coll Ave West, Singapore 138527, Singapore
基金
新加坡国家研究基金会;
关键词
Fungal diversity; Internal transcribed spacer; Mangrove microbiome; Marine fungi; Microbial ecology; Southeast Asia; MARINE FUNGI; MICROBIOME; DIVERSITY; CONSERVATION; BIODIVERSITY; RESTORATION; ADAPTATION; SEAGRASS;
D O I
10.1186/s43008-020-00042-y
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Mangrove forests are key tropical marine ecosystems that are rich in fungi, but our understanding of fungal communities associated with mangrove trees and their various organs remains limited because much of the diversity lies within the microbiome. In this study, we investigated the fungal communities associated with the mangrove treeSonneratia albathroughout Peninsular Malaysia and Singapore. At each sampling location, we collected leaves, fruits, pneumatophores and sediment samples and performed amplicon sequencing of the ribosomal internal transcribed spacer 1 to characterise the associated communities. Results show distinct fungal communities at each sampled location with further differentiation according to the plant part. We find a significant distance decay of similarity, particularly for sediment samples due to the greater variability of sediment environments relative to the more stable fungal habitats provided by living plant organs. We are able to assign taxonomy to the majority of sequences from leaves and fruits, but a much larger portion of the sequences recovered from pneumatophores and sediment samples could not be identified. This pattern underscores the limited mycological research performed in marine environments and demonstrates the need for a concerted research effort on multiple species to fully characterise the coastal microbiome and its role in the functioning of marine ecosystems.
引用
收藏
页数:9
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