Molecular dynamics study of lipid bilayers modeling the plasma membranes of normal murine thymocytes and leukemic GRSL cells

被引:31
作者
Andoh, Yoshimichi [1 ]
Okazaki, Susumu [1 ]
Ueoka, Ryuichi [2 ]
机构
[1] Nagoya Univ, Dept Appl Chem, Chikusa Ku, Nagoya, Aichi 4648603, Japan
[2] Sojo Univ, Grad Sch Life Sci, Kumamoto 8600082, Japan
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES | 2013年 / 1828卷 / 04期
关键词
Plasma membrane; Cancer; Thymocyte; Molecular dynamics calculation; Structure; Fluidity; PARTICLE MESH EWALD; FIELD GRADIENT-NMR; LATERAL DIFFUSION; SPHINGOMYELIN BILAYERS; DOMAIN FORMATION; LYMPHOID-CELLS; MIXED BILAYERS; FORCE-FIELD; PFG-NMR; CHOLESTEROL;
D O I
10.1016/j.bbamem.2013.01.005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Molecular dynamics (MD) calculations for the plasma membranes of normal murine thymocytes and thymus-derived leukemic GRSL cells in water have been performed under physiological isothermal-isobaric conditions (310.15 K and 1 atm) to investigate changes in membrane properties induced by canceration. The model membranes used in our calculations for normal and leukemic thymocytes comprised 23 and 25 kinds of lipids, respectively, including phosphatidylcholine, phosphatidylethanolamine, phosphatidylserine, phosphatidylinositol, sphingomyelin, lysophospholipids, and cholesterol. The mole fractions of the lipids adopted here were based on previously published experimental values. Our calculations clearly showed that the membrane area was increased in leukemic cells, and that the isothermal area compressibility of the leukemic plasma membranes was double that of normal cells. The calculated membranes of leukemic cells were thus considerably bulkier and softer in the lateral direction compared with those of normal cells. The tilt angle of the cholesterol and the conformation of the phospholipid fatty acid tails both showed slower level of order in leukemic cell membranes compared with normal cell membranes. The lateral radial distribution function of the lipids also showed a more disordered structure in leukemic cell membranes than in normal cell membranes. These observations all show that, for the present thymocytes, the lateral structure of the membrane is considerably disordered by canceration. Furthermore, the calculated lateral self-diffusion coefficient of the lipid molecules in leukemic cell membranes was almost double that in normal cell membranes. The calculated rotational and wobbling autocorrelation functions also indicated that the molecular motion of the lipids was enhanced in leukemic cell membranes. Thus, here we have demonstrated that the membranes of thymocyte leukemic cells are more disordered and more fluid than normal cell membranes. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:1259 / 1270
页数:12
相关论文
共 66 条
[1]   LATERAL DIFFUSION IN THE LIQUID-PHASES OF DIMYRISTOYLPHOSPHATIDYLCHOLINE CHOLESTEROL LIPID BILAYERS - A FREE-VOLUME ANALYSIS [J].
ALMEIDA, PFF ;
VAZ, WLC ;
THOMPSON, TE .
BIOCHEMISTRY, 1992, 31 (29) :6739-6747
[2]   PLASMA MEMBRANES - PHOSPHOLIPID AND STEROL CONTENT [J].
ASHWORTH, LA ;
GREEN, C .
SCIENCE, 1966, 151 (3707) :210-&
[3]   FINITE REPRESENTATION OF AN INFINITE BULK SYSTEM - SOLVENT BOUNDARY POTENTIAL FOR COMPUTER-SIMULATIONS [J].
BEGLOV, D ;
ROUX, B .
JOURNAL OF CHEMICAL PHYSICS, 1994, 100 (12) :9050-9063
[4]   Molecular dynamics simulations of SOPS and sphingomyelin bilayers containing cholesterol [J].
Bhide, Shreyas Y. ;
Zhang, Zhancheng ;
Berkowitz, Max L. .
BIOPHYSICAL JOURNAL, 2007, 92 (04) :1284-1295
[5]  
Cevc G., 1987, PHOSPHOLIPID BILAYER
[6]   Structure of sphingomyelin bilayers: A simulation study [J].
Chiu, SW ;
Vasudevan, S ;
Jakobsson, E ;
Mashl, RJ ;
Scott, HL .
BIOPHYSICAL JOURNAL, 2003, 85 (06) :3624-3635
[7]   Combined Monte Carlo and molecular dynamics simulation of hydrated lipid-cholesterol lipid bilayers at low cholesterol concentration [J].
Chiu, SW ;
Jakobsson, E ;
Scott, HL .
BIOPHYSICAL JOURNAL, 2001, 80 (03) :1104-1114
[8]   PARTICLE MESH EWALD - AN N.LOG(N) METHOD FOR EWALD SUMS IN LARGE SYSTEMS [J].
DARDEN, T ;
YORK, D ;
PEDERSEN, L .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (12) :10089-10092
[9]   SOLVENT-INDUCED FORCES BETWEEN 2 HYDROPHILIC GROUPS [J].
DURELL, SR ;
BROOKS, BR ;
BENNAIM, A .
JOURNAL OF PHYSICAL CHEMISTRY, 1994, 98 (08) :2198-2202
[10]   A SMOOTH PARTICLE MESH EWALD METHOD [J].
ESSMANN, U ;
PERERA, L ;
BERKOWITZ, ML ;
DARDEN, T ;
LEE, H ;
PEDERSEN, LG .
JOURNAL OF CHEMICAL PHYSICS, 1995, 103 (19) :8577-8593